KEGG   Ictalurus punctatus (channel catfish): 108275444
Entry
108275444         CDS       T04658                                 
Symbol
cntn1a
Name
(RefSeq) contactin-1a isoform X1
  KO
K06759  contactin 1
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    108275444 (cntn1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ipu04515]
    108275444 (cntn1a)
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ipu00537]
    108275444 (cntn1a)
Cell adhesion molecules [BR:ipu04515]
 Immunoglobulin superfamily
  Contactins
   108275444 (cntn1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ipu00537]
 Others
  108275444 (cntn1a)
SSDB
Motif
Pfam: Ig_3 I-set ig Ig_2 fn3 V-set Ig_5 V-set_CD47 Sp38 Pur_ac_phosph_N Interfer-bind DUF4998 PAXX
Other DBs
NCBI-GeneID: 108275444
NCBI-ProteinID: XP_053541890
Ensembl: ENSIPUG00000014406
UniProt: A0A9F7RJJ4
Position
14:complement(19850481..19923555)
AA seq 1026 aa
MCHLTPLLLALSLALSSSPAYGDAAGIFDDSSGYGPVFEEQPFDTIYPEESQEDKIIMSC
RARASPPATYEWRLNGLDIENLEEGNTDYSLMGGNLVISRPDKTSHAGNYSCLATNEFGT
VISQEASLQFGYLDMFSTEEREAVRVKEGQGVVLLCAPPPHSPDDLTFRWMLNEFPIFIP
LDKRRFVSQTTGNLYIAKVEASDSGNYSCFVSSLSIAKSVFSKFIPLVPQTERSIRKYAA
DIKVQFPDTYALVGQNITLECFALGNPIPQIKWRKVDGALPVHHEISMAGGLLRLFNVQY
EDEGVYECEALNSKGKDWHKANLYVEAAPEWVEQISSSERNIGSDYTMSCIASGKPKPHV
YFLKDGQMHDMHELRFTDLTSDDSGMYQCIAENRHGVIHANAELRVFEGAPSFEFNPVKQ
RLLAAKNGRIVIECKPKAAPRPTFSWSKGTELLSNSSRIFIWEDGSLEIRNVTKSDEGKY
TCFAENDRGKANSTGSLSVTDATKITLAPSNADVSVGENARMQCAASHDSSLDITFIWSL
NGHAIDKEEEYYQYTIDSQAGMSSCELLIKKTQLKHAGLYTCMAQTPVDNVTVSADLVVR
GPPGAPGGVRVEEVLAKSVKLFWSHGTDNLSPISKYTIQYRETRTEEEWKDAVTSPRNVE
GNAEMAMVVDLHPWTEYEFRVIATNTLGTGEPSEPSSKTITKEAAPVVAPSDVGGGGGTS
RELTITWTPVQPQYYYGKNFGYIIAFKPHNDTQWHRVTIADPRANHYIHKDPSTPPATKF
DVKVKAFNSAGEGPYSLTAVVYSAQDAPSEAPIIVEARTLSATEAIVWWQTLTQQTVEGY
QVRYWRKSVENEASAHRISSRENQTRLDNMKPNSHYVIEVRAFNGAGYGPASQRYEIHTK
KAPPSRPPKIIGTRVNSSGTVVNIAWQHVEALANESAVESYKVLYRQEGHSTGTLYTTSK
QSIDLPIHKDGDYLVEVRAQSKGGDGALARVRISDQLSVRPAGGALSVPSLSLCVLLLVA
LLSLTL
NT seq 3081 nt   +upstreamnt  +downstreamnt
atgtgtcatctcacgcctctcctgctcgctctgtccctcgcactctcctccagtcctgca
tatggtgacgcagctggcatctttgacgattcctcaggctatggacctgtgtttgaggag
cagccctttgacaccatctaccctgaggagtctcaagaggacaagataatcatgagttgc
cgagcacgagccagcccacctgccacatacgagtggaggctgaatggcttggacattgag
aacctggaggagggtaacacagactacagcctgatggggggaaatctggtcatcagcaga
cctgataagaccagtcatgctgggaattactcctgcctggccacaaacgagttcggcacc
gtcatcagtcaagaggcatctctccagtttggatatttagatatgttttccacagaggaa
agagaagccgtgcgtgtgaaggaaggtcagggagtggtgctgttatgtgctcctcctccg
cattccccagatgatcttaccttccgctggatgctcaatgaatttcccatcttcatcccg
ctggataagagacgcttcgtctctcagaccacaggaaatctgtatattgctaaagtagag
gcttctgacagcgggaactactcctgcttcgtctccagcttatctatcgctaagagtgtc
ttcagcaagtttatccctttagtcccacagactgagcgttctattcggaaatacgcagcc
gatataaaagtgcagtttccagacacgtatgctcttgtcggccagaacatcaccctggag
tgtttcgcattaggaaatcccattcctcagatcaaatggaggaaggtggacggagcgctg
cctgtccatcatgagatcagcatggcaggtggacttctgcgcctctttaacgtgcagtat
gaggatgagggagtatacgagtgtgaggcactcaactctaaaggcaaagactggcacaaa
gcaaacctctatgtggaagctgctccggaatgggtggagcaaatcagcagcagtgagagg
aacatcggcagtgactataccatgtcctgcatagccagtggaaaacccaaacctcatgtg
tacttcttgaaagatggccaaatgcatgacatgcatgagttgcgcttcacagacctgaca
tctgatgactcagggatgtatcagtgcattgctgagaaccgccatggagtgatccacgcc
aacgctgaattgcgagtctttgagggcgctccttcatttgagttcaacccggttaagcag
agactgcttgcagcaaagaatggccgtattgtgattgagtgcaaaccaaaagcagcaccc
agacccacgttttcctggagcaaaggcacagagctgctgtccaattccagcaggattttc
atttgggaggacgggagtctggagatccgaaacgttaccaagtcagatgaagggaagtac
acatgctttgctgagaacgaccgaggcaaagccaacagcactggatctctctcagtcaca
gatgccactaagatcacgctggctccctctaacgctgatgtgagcgtgggcgaaaacgct
aggatgcagtgtgcggcgtcacatgactcgagccttgacatcaccttcatctggtcactt
aacggccatgccattgacaaggaggaagagtactaccagtacaccattgatagtcaggca
ggtatgtctagctgtgagctgttaattaagaaaactcagctgaagcatgcaggcctgtac
acctgcatggcccagacacctgtggacaacgtcaccgtctctgctgacctggtagtgaga
gggcctccgggagctccaggaggagtgcgtgtggaggaggttttggcaaagtctgtgaag
cttttctggagtcatggcacagataatctcagccccatatccaaatacaccatccaatac
agagagaccagaactgaggaggaatggaaagatgctgtaacctctcctcgcaatgtagaa
ggaaatgcagagatggccatggtagttgatctgcatccttggactgaatatgagtttcgg
gtcatcgctacgaacactctgggtacaggagaaccgagtgagccttcaagcaaaaccatc
acaaaggaagcagctcctgtggtggcaccctcagatgtaggaggaggtgggggaacaagt
agagagctcaccatcacatggacgcctgttcagccacaatactactatggcaagaacttt
ggctacattatcgcatttaagcctcataatgacactcagtggcatagagtgaccatagct
gaccctcgtgccaatcactacatccacaaagacccctctactccccctgccacaaagttt
gatgtgaaagtaaaggccttcaacagtgcaggagagggaccctacagtctcactgcagtt
gtatactctgctcaagatgcaccctcagaggctcccatcattgtagaggccagaaccctg
tcagcgacggaggccattgtgtggtggcaaacactcacgcagcagacagttgagggctat
caggtgaggtactggaggaagtctgtggagaacgaggcgtcagcacatcgcatctccagc
agagagaaccagacacgcctggacaacatgaagcctaactcccattatgttatagaagtg
cgtgcgttcaatggtgcaggttatggaccggcgagccagagatatgagatccacacaaag
aaagcacctccaagtcggccaccaaaaataatcggcacaagggtgaattccagtggaacc
gtagtcaatatcgcctggcagcatgtggaggctttagccaatgagtctgctgtggagagc
tataaggttctgtatagacaggagggtcacagcactgggacactgtacactacaagtaag
cagtccatagacctgcccattcacaaagatggagattacctggtggaggtgagggcacaa
agcaagggaggtgatggcgctttggctcgagtgcgcatctcagaccagctcagcgttaga
ccggctggaggggccttgtcagttccatccctgagtctctgtgtcctgctgctggtggca
ttgctcagcctgactctctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (13)   
   Pfam (13)   
All databases (39)   

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