KEGG   Ictalurus punctatus (channel catfish): 108275942
Entry
108275942         CDS       T04658                                 
Name
(RefSeq) tubulin alpha-1A chain-like
  KO
K07374  tubulin alpha
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04145  Phagosome
ipu04210  Apoptosis
ipu04530  Tight junction
ipu04540  Gap junction
ipu04814  Motor proteins
ipu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    108275942
  09143 Cell growth and death
   04210 Apoptosis
    108275942
  09144 Cellular community - eukaryotes
   04530 Tight junction
    108275942
   04540 Gap junction
    108275942
  09142 Cell motility
   04814 Motor proteins
    108275942
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108275942
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ipu03019]
    108275942
   03036 Chromosome and associated proteins [BR:ipu03036]
    108275942
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ipu04812]
    108275942
   04147 Exosome [BR:ipu04147]
    108275942
Messenger RNA biogenesis [BR:ipu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108275942
Chromosome and associated proteins [BR:ipu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     108275942
Cytoskeleton proteins [BR:ipu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    108275942
Exosome [BR:ipu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108275942
  Exosomal proteins of other body fluids (saliva and urine)
   108275942
  Exosomal proteins of colorectal cancer cells
   108275942
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 108275942
NCBI-ProteinID: XP_017342600
Ensembl: ENSIPUG00000022256
UniProt: A0A2D0SJX5
Position
15:4407571..4411907
AA seq 451 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RTRKLADQCTGLQGFLVFHSYGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAMYDICRRNLDIERPTYTNLNRLVGQILSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLTTYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIANIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSTEGEGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgcgagtgcatctctatccatgttggtcaggctggtgttcagattggcaatgcgtgc
tgggaactctactgtcttgaacacggcatccagccggacggacagatgcccagcgacaag
accattggaggtggagatgattccttcaacaccttcttcagtgagactggagctggaaag
catgtccccagggctgtgtttgtggatctggagcccactgtcatagatgaggtccgcact
ggaacataccgccagctgttccaccctgagcagctcatcacaggaaaagaggatgctgcc
aataactacgctcgcggtcactacactattggcaaggaaattattgatctggtgttggac
aggacccgcaaactggctgaccagtgcacaggtctccagggtttcctggtcttccacagc
tatggtggtggaaccggttctggtttcacctccctgctgatggaacgcctgtctgttgac
tacggtaagaagtccaagctggagttctccatctacccagctccccaggtgtctactgct
gtggtggagccctacaactccatcctgaccacccacaccaccctagagcactctgactgt
gctttcatggtggacaacgaagccatgtatgacatttgccgtagaaacctcgatattgag
cgccctacatacactaacctgaataggctggttggtcagatcttgtcctccatcacggcc
tctctccgtttcgatggcgccctcaatgtcgaccttactgaattccagaccaacttagtg
ccctaccctcgcattcatttcccactgaccacctatgctccagtgatctctgcagagaag
gcttaccacgagcagctctctgtagctgaaatcacaaatgcctgctttgagccggccaat
cagatggtgaaatgtgacccacgtcacggcaagtacatggcctgctgcctgctgtaccgt
ggtgatgtggtgcctaaagatgtgaatgctgctattgcaaacatcaagaccaagcgcacc
atccagtttgtggactggtgtcccactgggttcaaggtgggcatcaactaccagcctccc
actgtggttccaggtggagacctggccaaggtgcagagggctgtgtgcatgctgagcaac
accacagctattgctgaggcctgggctcgtctcgatcacaagttcgatctgatgtacgcc
aagcgcgcctttgtgcactggtatgttggtgagggtatggaagagggtgagttctctgag
gccagagaggacatggctgccctggagaaagattatgaagaagttggtgtagactccact
gaaggtgaaggagaggaagagggagaggagtactaa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (334)   
   KEGG ORTHOLOGY (1)   
   RefGene (329)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (352)   

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