KEGG   Ictalurus punctatus (channel catfish): 108276728
Entry
108276728         CDS       T04658                                 
Symbol
clip1b
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
  KO
K10421  CAP-Gly domain-containing linker protein 1
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    108276728 (clip1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ipu03036]
    108276728 (clip1b)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ipu04812]
    108276728 (clip1b)
Chromosome and associated proteins [BR:ipu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Microtubule-associated proteins
     108276728 (clip1b)
Cytoskeleton proteins [BR:ipu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Cytoplasmic linker proteins (CLIPs)
     108276728 (clip1b)
SSDB
Motif
Pfam: CAP_GLY CLIP1_ZNF Prefoldin_2
Other DBs
NCBI-GeneID: 108276728
NCBI-ProteinID: XP_017344083
UniProt: A0A2D0SP77
Position
16:5650832..5674570
AA seq 951 aa
MSTGKPSGLKPPTKISRPSSVPTKTSPPSATLKTLTSTGPGAPVVNDSVAEFTVGERVWV
NGNKPGYVQFVGVTQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEDLRGIFTRPSKLSR
TPLPECEANGAPPSTSQASAAVIPASSAAAAEGQATTATKTSTNLATAASGSVSNLSETD
STMKGKRELKLGDRVLIGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGSVAGARYF
QCLPKYGLFAPTHKVTRIGFPSTTKTKSSRRRSTLQHSPSASSVSSLSSVTSSVGGKPSR
AGLLTETSSRYARKISGTTALLEALKEKQQHIEQLLAERDLERTEVAKATCHAGEVQQEL
ALLRKGQEQYVLEMEAKLDQLRRLVETADREKVELLNQLEEEKRKVEDLQFRVEEAYITK
GDLETQTKLEHAHIKELEQSLLFEKTKADKLQRELEDTRVATVSERSRIMELEKEVSELQ
LRLRSQRAEAGSGSPPLQDKKVRELSNELEARHKEMLLLQQRLSSSHQENISLQHQLDDL
KKKLDTEAEESKKNALSIQEMQSSMQADKEQLEQLHSEKQKLEEEIASRQQQELRCNEEH
KQQEKELQERLGRAEQELSKVQESSAELEQKVAELQMFKDKTQSGQSADALEHLKQRNQD
LQQELEALKQQNSNYQEELNMCKEQLSSENQRTGSLCKEIEELKLTANQKSLRLVALQEE
NEKLSQKLDGSRQGEHLTTDNQSEIRERENVNTLISEKDKELEALRNEIAVLRGENAMAK
TLQAAVESLERDKVKLQSRVHSLEQKLEGRPRDDQDDNSSGDAAISQLKEEKEFAEGQIN
FLNSVIVDLQRKNEELKVKLKKMALAEFNGNDENDGSGEIRKKKKAPPRVFCDICDCFDL
HDTEDCPTQTQSPDSPPHSTHHGSRGGERPYCDICEAFGHWTDSCNDDQTF
NT seq 2856 nt   +upstreamnt  +downstreamnt
atgagtacagggaagccaagtggtctcaagccacctactaagatcagtaggcctagctct
gtaccaaccaagacctcccctccttcagccaccctgaaaactttaacttccacaggtcct
ggtgctccagttgttaatgactcggtggcagagtttactgtcggtgaacgtgtatgggtg
aacggaaataagccgggatatgttcagtttgtcggcgtaacccagtttgcgccaggccaa
tgggcaggcattgttttggatgagcctataggaaagaacgatggctctgttgccggagtg
cgctacttccaatgcgaggacttgcgaggaatcttcacccggccttctaaactgtcccgg
actcctcttccggagtgtgaggccaacggtgcgccaccttccaccagccaggcatcagct
gctgtcattcctgcttcatcggctgctgctgcggaaggtcaagccacgaccgctactaag
acctcaacaaacctggccacagcggccagcggatctgtctccaacctgtctgaaacagat
tcgaccatgaagggaaaacgggagctgaagctgggcgatcgtgtgctgatcgggggaacg
aaggcaggtgttgtgcgcttcctcggcgagactgattttgctaaaggggaatggtgtggg
gtggagcttgatgagcctcttggcaagaatgatggatcagtggctggtgccaggtatttt
cagtgtctgccaaagtatggtctctttgctccaacacataaagtgacccgcattggcttc
ccgtccaccaccaaaaccaaaagctcaaggcgcaggtccactctgcagcatagccccagt
gcctcttcagtcagctcactgagctcagtcacctcttctgtaggaggaaaacccagtcga
gcaggcctgctgacagagacctcatcccgctatgcacgaaagatctcggggaccacagcc
ttgctggaggctctgaaggagaaacaacagcacatcgagcaactcctggctgagagggat
ctagagcgaacggaagtggccaaggcaacctgccacgctggagaggtgcagcaggagctg
gccttgctcagaaaaggccaggagcagtatgttcttgagatggaggctaaactcgaccag
ttacgcaggcttgtggagactgcagacagggaaaaagtggagttgttaaatcagcttgaa
gaggaaaaaaggaaggtagaagatcttcaattccgtgtagaggaagcttacattaccaaa
ggtgacttagagacgcagaccaaactggagcatgcccacattaaggagctcgaacagagc
cttctctttgaaaagaccaaagctgataaactccagagggagttagaggatactagggtg
gccacggtgtctgaaaggtcccggatcatggagctggagaaggaagtgtcagagctgcag
ttacgcctacgatctcagcgagcagaagctggatcaggctcacctccattacaggacaaa
aaggttagggagctgagcaatgagttggaggccagacacaaggagatgctgctcctccag
cagagactcagctcctctcatcaggagaacatttcccttcagcatcagctggatgatttg
aagaaaaaacttgatacagaagctgaagaaagtaaaaaaaatgcactctccatacaagag
atgcagagtagcatgcaagcagacaaggaacaactggagcagctgcacagtgaaaagcag
aagctggaggaagagatagcctcgaggcagcagcaggagctgcgatgtaatgaggagcac
aagcagcaggagaaggagctgcaagagagactaggccgagcggagcaggagctgagcaaa
gtgcaggaaagcagtgctgagctggagcagaaggtggctgagctgcagatgttcaaggac
aaaacccagagtggccagtctgcagatgctttggaacatctaaaacaaagaaatcaagat
ctacaacaagagcttgaagccctgaagcagcaaaactccaactatcaggaggagcttaat
atgtgcaaggagcagctcagttctgagaaccagcgcactggaagcctgtgcaaagaaatt
gaggagctgaagctaacagccaatcagaagtcattgaggcttgtggcactccaggaagaa
aacgagaagttgtctcagaaactagatggcagccgacagggtgagcatctgactacggac
aaccagtcggagattagggagagggaaaacgtcaacactttaatatccgagaaggacaaa
gaattagaagcgttaagaaatgagattgcagtgttgcgtggagagaatgccatggctaaa
acactgcaggcagcggtggagtctctggagcgggacaaggtgaagctacagagcagagtg
cacagcctcgaacagaagctggagggtagaccgagggatgaccaggatgacaattcctca
ggtgatgcagctataagccagcttaaagaagagaaagagtttgctgagggacagatcaac
ttcctcaactcggtcatcgtagatcttcagaggaagaacgaggagctgaaggtgaagctg
aagaaaatggccttggctgagttcaatgggaacgacgagaacgacgggtcgggtgagatc
aggaaaaagaagaaagccccgccacgtgtcttctgtgacatctgtgactgttttgacctg
cacgatacagaagactgtcccacccaaacgcagtctcccgactcgccgcctcatagcaca
catcacggcagccgcggaggagagcggccctattgcgacatctgcgaggcgttcggccac
tggacggactcctgtaatgacgaccaaaccttttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (70)   
   KEGG ORTHOLOGY (1)   
   RefGene (66)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (91)   

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