KEGG   Ictalurus punctatus (channel catfish): 108276854
Entry
108276854         CDS       T04658                                 
Symbol
itga2.2
Name
(RefSeq) integrin alpha-2 isoform X3
  KO
K06481  integrin alpha 2
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03271  Virion - Rotavirus
ipu04145  Phagosome
ipu04510  Focal adhesion
ipu04512  ECM-receptor interaction
ipu04810  Regulation of actin cytoskeleton
ipu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    108276854 (itga2.2)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    108276854 (itga2.2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    108276854 (itga2.2)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108276854 (itga2.2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    108276854 (itga2.2)
   04810 Regulation of actin cytoskeleton
    108276854 (itga2.2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ipu04147]
    108276854 (itga2.2)
   04515 Cell adhesion molecules [BR:ipu04515]
    108276854 (itga2.2)
   04090 CD molecules [BR:ipu04090]
    108276854 (itga2.2)
Exosome [BR:ipu04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   108276854 (itga2.2)
  Exosomal proteins of bladder cancer cells
   108276854 (itga2.2)
Cell adhesion molecules [BR:ipu04515]
 Integrins
  Integrin alpha subunits
   108276854 (itga2.2)
CD molecules [BR:ipu04090]
 Proteins
  108276854 (itga2.2)
SSDB
Motif
Pfam: VWA Integrin_A_Ig_2 FG-GAP Integrin_A_Ig_3 Integrin_A_Ig_1 FG-GAP_3 VWA_2 ITGAX-like_Ig_3 HisK_sensor Integrin_alpha
Other DBs
NCBI-GeneID: 108276854
NCBI-ProteinID: XP_047016746
Ensembl: ENSIPUG00000021817
UniProt: A0A979F958
Position
16:25439802..25478469
AA seq 1075 aa
MSLGLTLIRTTKNAGFMTCGPLWAQGCGSQYFYPGVCAEVSPLFVPQPAFSPALQTCGGP
MDIAIVLDGSNSIYPWPPVVEFLKKLLGHLDIGPQQSQVSIIQYGVDPKMEFKLNAYKTR
ASIVQAASAIPQRGGIETNTFRAIEYARVNAFLPANGGRPGASKVMVVVTDGESHDNSRR
NTVIPACEKDGITRFGIAVLGYYIRNNIDSKKLVEEIKSIASNPADKYYFNVSAEEALLE
IAGTLGDRIFNIEGTGTGGEFQMELSQVGFSAHQTKNQDVMMLGAVGAYGWTGTVVHKTA
QTSEIFPKGAFEQILEDKNHSSLLGYSVSTLYSGSTEYFVAGAPRSNHTGQVVVYTLNKR
RQPDIRHSQRGDQIGSYFGSVLCPLDVDRDGVTDLLLVGAPMYMSDAKKEMGKVYIFTVT
DGFLSSQGFLEGSSRLENARFGMAISAASDLNLDGLTDVVVGAPLEENGQGAVYIYNGDA
RSIRKQSSQKILAVKLDPTLRYFGRSLDAAGDLNGDSVPDVSVGSYGKVLQLWSRGVAVV
TARVTFTPDMINIESKPCSFSGRKVSCFIAKVCFSAAFKPTTPVGPAEIKYNMTLDADLR
SSRFSSRGQFGNSERVVQQNVGVSTAETCEEHQVYVQDTPDLESIAVRVDIGLQQPDSSP
VLDAFSPSAWEFFIPFIKDCGGDDMCYSDLVLSVEREPPSSLLLVSKNNRLSLSVTVMNR
KENAYNTRVIARFSSNLFYSSVTPPSDDTEVKCTSSKDTEIVTCQVGYPALRTDQLVTFE
INFDFNLARLQKEVKVAFEAQSDSKEETPADNSETMAIPIQYRTEIILSREANMNVYLLD
EKDEITNPIKTYSDIGPELKFNLKVSGAVFPVSLVYLDVSLPVSTKSGNHLLYVTSVEST
PQSDVQCETQALIDPFKIRDKEYTATFTKESFRGTSHLNCDSAVCKQLKCVLKDLSVKSD
YYISVSARIWNGTFAEADFQSVVLDVNAQIETSQSDLLVIAHKQVTVDVTVSKPGAKADV
PVGVIVGSVIGGLLLLAVAVAVLWKLGFFKRKYQQLQRGDDGAEAEGLQDNAGQQ
NT seq 3228 nt   +upstreamnt  +downstreamnt
atgagtctgggtctgaccctgatacgaaccaccaaaaacgccggatttatgacatgtggt
cctctctgggctcagggttgtggttctcagtatttctacccgggagtgtgtgcggaagtg
agccctctgttcgtcccgcaaccagcgttctctcctgctctacaaacttgcggcgggccg
atggacatcgctatagtcctggacggatctaacagtatttatccttggcctcctgtcgtg
gagtttcttaagaagctcttaggacacctcgatatcggaccgcagcaatctcaggtcagc
atcattcagtatggcgtcgatcccaaaatggagttcaagctgaacgcttataaaaccaga
gcgtcgatcgttcaggcggcttcggcgattcctcagagaggtggaatcgagacgaacacg
tttcgagccatcgagtacgccagggtgaacgcttttctgcctgcaaacggaggacgtccg
ggtgccagtaaagtgatggtggtggtgactgatggagagtcacatgataactcccgaaga
aacacggtcattccagcgtgcgaaaaagacggcattacccgtttcggcatcgctgtgctc
gggtactacataaggaataacatcgacagcaaaaagcttgtcgaggaaatcaagtcgata
gccagcaatcctgcagataaatattatttcaacgtgtccgccgaagaggctctcttggag
atcgccggaaccctgggagatcggatcttcaacatcgaaggcacgggtacaggcggtgaa
tttcagatggagttgtcgcaggttggcttcagcgcacaccagaccaaaaaccaggacgtg
atgatgctcggggccgtcggggcgtacgggtggaccggaactgtagtgcataaaaccgct
cagacgtcagagattttccccaaaggagcttttgagcaaatccttgaagacaaaaaccac
agttcgctcctgggatactcggtgagcactctgtatagcggttccaccgagtactttgta
gccggtgctcctcgctccaaccacacgggtcaggttgtggtgtacacactgaacaagcgg
agacaacccgacatccgacactcacagagaggcgatcagatcggctcgtacttcggaagt
gtgctctgtccgctcgatgtggatcgtgacggggttactgaccttctgctggtcggcgct
ccgatgtacatgagcgacgcgaagaaggagatgggcaaagtctacatcttcaccgttacc
gacgggttcttgagtagccaggggtttctggaaggttcctctagactggagaacgctcgg
ttcggaatggccatctccgctgcttctgacctcaacctggacggcttgaccgacgtggtg
gtcggagcgccgctggaggagaacggccagggagccgtttatatttataacggagacgct
cggagcatcaggaagcagagctcacagaaaattcttgccgtgaaactggacccgacgttg
aggtacttcggacgctccttagacgccgctggagatctgaacggagactcggtcccggac
gtctcggtgggcagttatgggaaagtgcttcagctctggtccaggggagtggcggtggtg
acggcccgggtcacgttcaccccggacatgatcaacatcgagagtaaaccgtgtagcttc
agtggacggaaggtgtcctgttttatagccaaagtctgcttcagcgcagcgttcaaaccg
acgacgcctgtcggacctgcagagattaaatacaacatgacgctggacgctgacctgcgg
tcgtctcgattcagctccagaggtcagttcgggaactccgagcgagtggtccagcagaac
gtcggcgtgtccacggccgagacgtgtgaggaacatcaggtgtacgttcaggacactcca
gacctcgaatccatcgccgtccgagtcgatatcggactccagcagccggactccagcccc
gtcctggacgccttcagtcccagcgcatgggagttttttatcccatttattaaagactgt
ggtggtgatgacatgtgctacagcgacttggtgttgagcgtcgagagagaaccaccaagc
tccttgttgctggtgagtaagaacaatagactgtcactgtccgtgacggtgatgaacagg
aaggaaaatgcctacaacaccagagtgatagcacgcttctccagcaacctgttctacagc
tccgttacgccacctagcgatgataccgaggtcaaatgcacctccagtaaagacaccgaa
atcgtcacgtgtcaagttggatatccagcgctcaggactgaccagttggtgacattcgag
atcaattttgactttaatttggcacgattacaaaaggaagtcaaagtggccttcgaagcc
cagagtgacagtaaagaggaaactccagcggataacagtgagacgatggcgatccccatc
cagtacaggaccgagatcatcctcagcagagaagccaacatgaatgtttacttgctggat
gaaaaggatgaaattacaaatccgataaaaacgtacagtgacatcggcccggagttgaag
ttcaatctcaaggtgtctggagcagtgtttccagtcagtctggtttacctcgacgtctcg
ctgcccgtcagtactaaatcagggaatcatctgctgtatgtgacctcagtcgagagcaca
ccgcagagtgatgttcagtgtgagacccaagcgctgatcgacccgtttaagatcagagac
aaagaatacacagccacattcaccaaggagagcttccgaggaaccagtcacctgaactgc
gactcggccgtgtgtaagcagctgaagtgtgtgctgaaagacctgagcgtgaaaagtgat
tactatatcagcgtctccgcgaggatctggaacggaacgttcgccgaggctgatttccag
tcggtcgtattagacgtgaacgctcagatcgagacgtctcagtctgatctactcgttatc
gcccacaaacaagtgacggtcgatgtcactgtgagtaaaccaggtgccaaagctgatgta
cctgtcggagtgatcgtgggcagcgtgattggaggattactcctgctggctgttgctgtc
gcagtgctgtggaagctgggcttctttaagcgtaaataccagcagctgcagagaggcgat
gacggtgctgaagcagaaggactacaggacaacgcaggacaacagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (10)   
   Pfam (10)   
All databases (47)   

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