KEGG   Ictalurus punctatus (channel catfish): 108278929
Entry
108278929         CDS       T04658                                 
Name
(RefSeq) ceramide transfer protein isoform X1
  KO
K08283  collagen type IV alpha-3-binding protein
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ipu04990]
    108278929
Domain-containing proteins not elsewhere classified [BR:ipu04990]
 Pleckstrin homology (PH) domain-containing proteins
  Other PH domain-containing proteins
   108278929
SSDB
Motif
Pfam: START PH PH_8 PH_11 Acyl_CoA_thio
Other DBs
NCBI-GeneID: 108278929
NCBI-ProteinID: XP_017348185
Ensembl: ENSIPUG00000014574
UniProt: A0A2D0T0R7
Position
18:6808585..6851129
AA seq 670 aa
MRSRYTGAHTTAHTRSTEPLSADLSAAVRMSSSPLSNGKQMSDNQSWNSSGSEEDLETDP
GPHGGGVAEFSGVLSKWTNYIHGWQDRWVVLKNNTLSYYKSQDEREYGCRGSLCLSKAVI
MPHEFDECRLDISVNDSVWYLRALDPDHRHQWIDSIEQHRAESGYGSESSLRRHGSMLSL
TSATSSYSATSTSSFKKGNSLREKLAEMETFRDILCRQVDTLQKYFDACSDAVSKDELQR
DKIVEDDEDDFPTTRTNGEFLHNHNGSREKLFQSLSTKGLNGIDFKGEAITFKATTAGIL
ATLSHCIDLMVKREDSWQRRLDKETEKRRRVEEAYKTALSELKKKSHFGGPDYEEGPNSL
INEDEFFDAVEAALDRQDKIEEQTQTEKCRIQRPSPMPCGDIYSTMGTHRFAEKPLTPPS
PPLSCDVVLGPVCHHEHAFSAEVEEMVQSHMTYSLQDVGGDANWQLVVEEGEMKVYRREV
EENGIVLDPLKATHAVKGVTGHEVCHYFWDTEVRNDWETTVENFSIVETLSDNAIIIYQT
HKRVWPASQRDVLYLSAIRKIMASNENDPDTWIVCNFSVDHDNAQPSSRCVRAKINIAMI
CQTLVSPPEGNKEISRDNILCKITYVANVNPGGWAPASVLRAVAKREYPKFLKRFTCYVQ
EKTAGKPILF
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgcgaagtcggtacaccggcgcacacaccacggctcacactcgctcgaccgaacccctt
tcggctgatctctccgctgctgtccgaatgagctccagtccgctttccaacggcaagcag
atgtcggacaaccagagctggaactcgtcgggctctgaggaggatctggagacggatccc
ggacctcacggcggcggggtggcggaattcagcggcgtgctcagcaagtggaccaactac
atccatggctggcaggatcgctgggtcgtgctgaagaacaacactctgagttattacaag
tctcaggatgagagggagtatggctgcaggggctcgctgtgcctcagcaaggccgtcatc
atgccccatgagtttgatgagtgcaggttggatatcagtgttaacgacagcgtgtggtac
ctgagggctctggacccggaccaccgtcaccagtggatcgactccatcgagcagcacagg
gctgagtccggttatggttctgaatccagtttgaggagacatggctccatgctctctctc
acctcagccaccagcagctactctgccacgtccacctcctcttttaagaagggcaatagt
ctgcgagagaagctagccgagatggagacgttcagagacatcctgtgcaggcaggtggac
acgctacagaaatatttcgatgcctgctcagacgccgtgtccaaagatgagctgcagagg
gataagattgtggaggacgatgaagacgacttccctaccactcgcactaatggcgagttc
ctgcacaaccacaacggcagcagagagaagctgttccagtctctgagcactaagggcctc
aacggaattgattttaaaggcgaggcgatcacgtttaaagccactacagcggggatcctg
gccacgctctcgcactgcattgacctgatggtgaagagagaggacagctggcagaggaga
ctggataaggagacggagaaaaggaggagagtggaggaggcctataaaacggcattgtcc
gagctcaagaagaaatctcatttcggaggcccggactacgaggagggcccgaacagtctc
ataaacgaggatgagttcttcgatgccgtggaagccgcgctggacagacaagacaaaata
gaggaacagactcagacagaaaagtgtcggatacagaggcctagcccgatgccttgcgga
gatatctattccacgatgggcacccaccgattcgccgagaagcccctgactccgccctcc
ccccctctatcctgtgatgtagtgctcggtcccgtgtgtcatcacgagcacgcgttcagt
gctgaggtggaggagatggtacagagtcacatgacctactccctgcaggatgtgggcgga
gatgcgaactggcagcttgtggtcgaggaaggagagatgaaggtgtacaggagagaggta
gaggagaacggcatcgtgttggaccctttgaaagccacacatgcagtgaaaggggtcaca
ggtcacgaggtgtgccattacttctgggatacggaagtccgcaatgactgggaaactact
gttgaaaacttcagcatcgtggagacgttgtcagataacgccataattatctaccagacg
cacaagagggtgtggcctgcgtcacagagagacgtgctgtatttatcggcgatccgtaaa
atcatggccagcaacgagaacgaccccgacacgtggattgtgtgcaacttctctgttgat
cacgacaacgcccagccgagcagcaggtgcgtccgtgccaaaatcaacatcgccatgatc
tgccagacgctggtcagtccaccagagggcaacaaagagattagcagagacaacattctg
tgtaaaatcacatacgtggccaatgtaaaccccggaggctgggcccctgcgtctgtcctg
agagccgtagccaagcgagaataccccaaattcttgaagcgtttcacctgctacgtgcag
gagaaaactgccggcaagcccatcctcttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system