KEGG   Ictalurus punctatus (channel catfish): 108279758
Entry
108279758         CDS       T04658                                 
Name
(RefSeq) DNA helicase B
  KO
K15254  DNA helicase B [EC:5.6.2.3]
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ipu03032]
    108279758
Enzymes [BR:ipu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     108279758
DNA replication proteins [BR:ipu03032]
 Eukaryotic type
  DNA Replication Initiation Factors
   Other initiation factors
    108279758
SSDB
Motif
Pfam: AAA_30 AAA_19 Viral_helicase1 NR_Repeat AAA_11 UvrD_C_2 ABC_tran CbiA nSTAND3 KAP_NTPase ParA Zeta_toxin NB-ARC AAA_12 SH3_13 AAA_31 RsgA_GTPase
Other DBs
NCBI-GeneID: 108279758
NCBI-ProteinID: XP_053544097
Ensembl: ENSIPUG00000016651
UniProt: A0A9F7TS20
Position
19:17968834..17987802
AA seq 1311 aa
MEKRLSYNNMSASKYVKLVGYILPPKTDNAAEESENDEGEEEPVPEFLDMKEMASVFSGG
FMSQQSVPAADEVDFMFHGKKVRVKGRFPLRNPWWEISCGAQQHSRKLVVDGYPSYKLHT
DLKNGWRTFVSLFLKECDVEPNFVTRFMQWLPEDRYVDLINVVEALHEFGENIKDTREEA
DYAKSNIWKSDAGFLVRAATIYPYIMKYLPTLLPGQFLNLLKKGKEEEEKQQSKIDEGNR
EGSPQKNNTSPLARLEELIKTDVWKFGFGYVSKTGYWRDTNQSSMQKRPRSAFLRVCSAA
LYRSVSSRLKRSTDWLYMSWEKHMLALILPGCFCYIFSQMFCSFNSFCFASCPVDFMFHG
KKVRVKGRFPLRNPWWEISCGAQQHSRKLVVDGYPSYKLHTDLKNGWRTFVSLFLKECDV
EPNFVTRFMQWLPEDRYVDLINVVEALHEFGENIKDTREEADYAKSNIWKSDAGFLVRAA
TIYPYIMKYLPTLLPGQFLNLLKKGKEEEEKQQSKIDEGNREGSPQKNNTSPLARLEELI
KTDVWKFGFGYIMYKEFRLVRCETTLKDFMSCELFSKMSSEQQNALKVYHELKGYCSQFG
HTYIDRTVLEEKMKMQEERIWEAVAFLRKHGVVIIEKQKIALRNLYKYEKEIAECLQQLI
EGEPWKIDLDVRKVLLSAAHDLRESASGVHGPMDEEPEATSIKLDPDQVRAAEMMCANAV
TVVSGKGGCGKTTVVSMIFKAAMKQQEKIREDDHDSTREEGEKKENSKEPLEVLLTAPTG
RAASLLTKKTCFTAYTMHQVLWSYMLTKKQPSGEPINWKFANVRVLVVDEGSLVCVQILS
SILSMLTKHAQLQKFIILGDIRQLPSIQPGNVLNDLFTSLKKVNWAIEMCTNHRAESELI
VQNAGLIADMGVTKKFHNLNYDATVELGKKRTLPSPDKRFIEILLPEKENDDDLQNSIKC
LLRGPAPGLVDHESSQFVAFKRTECALINELCCKHYCNHNTKTHKNKMNFQIGDKVCCTR
NGYVTDIDKKDEAKDQEDEMDGSKSKKERLCNGEIFFITQDVTVKEDTARKCVKLRYLTL
DNKQGEKLTVEYRELMRQCKLRHAWARTIHTFQGSEEKTIVYVLDSGIPQTWKHVYTAVT
RGQSRVYVLAKKDGLENAIRRHVIKRNTRLEGHVVNLLHELGLADKDFLSQASQSQFNSP
KRGYGFQTTQSTHESLSSPGPSQAYPGMRNLKNVTCQNLTDTGSMFGDLSFPKSASPSPC
KRERTTDNCTMPSKQMKVDTPLGCSKLKSLSLNSITPRQLYPKAPQSHQDQ
NT seq 3936 nt   +upstreamnt  +downstreamnt
atggagaaaagattaagttataataatatgagcgccagtaaatacgtgaagttggtgggt
tacattttgccaccaaagacggataacgcggctgaagagtccgaaaacgacgaaggagag
gaagagccagtgccggagtttctggacatgaaggaaatggcctctgtcttttctggggga
ttcatgtctcagcagtctgtacccgcggcggatgaagtggatttcatgtttcatgggaag
aaagtacgtgttaagggccgatttcctctcaggaacccatggtgggagatctcctgcggt
gcccagcaacactcccgtaaactggtggtcgacggctacccttcctacaaactccataca
gacctgaaaaatggctggcgcactttcgtgtctctcttcctgaaggagtgtgatgtggaa
cctaattttgtcacccggttcatgcaatggctaccagaggacagatatgtggacctcata
aacgtagtggaagctctgcacgaatttggagagaatatcaaagacacaagggaagaagct
gattatgccaagtctaacatttggaaatcagatgcaggttttcttgtaagagctgccacc
atctatccttatatcatgaaatacttgccaacgttgctgccagggcagtttttaaatcta
ctgaaaaaagggaaagaggaagaggagaaacagcagtctaaaattgatgaaggaaacagg
gaaggttccccacagaaaaataatacgagtcccttagccagactggaagagctcatcaag
actgatgtgtggaagtttggctttggctatgtgagtaagactggatattggagagacact
aaccagtcaagtatgcagaaaaggccacgtagtgctttcctccgagtgtgttctgctgcc
ttgtaccgcagcgtgagcagccgtttgaaaagaagcactgactggctttacatgtcttgg
gagaagcacatgctagctctcatccttcctggatgtttttgctatattttttcccaaatg
ttctgtagttttaactctttctgctttgcttcatgtccagtggatttcatgtttcatggg
aagaaagtacgtgttaagggccgatttcctctcaggaacccatggtgggagatctcctgc
ggtgcccagcaacactcccgtaaactggtggtcgacggctacccttcctacaaactccat
acagacctgaaaaatggctggcgcactttcgtgtctctcttcctgaaggagtgtgatgtg
gaacctaattttgtcacccggttcatgcaatggctaccagaggacagatatgtggacctc
ataaacgtagtggaagctctgcacgaatttggagagaatatcaaagacacaagggaagaa
gctgattatgccaagtctaacatttggaaatcagatgcaggttttcttgtaagagctgcc
accatctatccttatatcatgaaatacttgccaacgttgctgccagggcagtttttaaat
ctactgaaaaaagggaaagaggaagaggagaaacagcagtctaaaattgatgaaggaaac
agggaaggttccccacagaaaaataatacgagtcccttagccagactggaagagctcatc
aagactgatgtgtggaagtttggctttggctatataatgtataaagagttccgattagtc
agatgtgagactacactgaaggactttatgtcctgtgagttattcagcaaaatgtcttct
gagcagcaaaatgccctgaaggtgtaccacgaacttaaaggctactgtagtcagtttggc
cacacctacattgaccggacggttctggaggagaagatgaaaatgcaagaagaacgcatt
tgggaagccgtggccttccttcgcaagcatggagtggtgatcatagaaaagcagaagatt
gccctgaggaatctctacaagtatgagaaagaaattgctgaatgtctccagcaactaata
gagggggaaccctggaagattgatctggacgtgaggaaggttctcctctccgcagcgcat
gatctaagagagtctgcctcaggtgtgcatggccccatggatgaagaacctgaggccacc
tctataaagctggacccagaccaagtgcgagcagcagagatgatgtgtgccaatgctgtg
acagtggtcagtggaaaggggggctgtggcaagaccaccgtggtcagtatgatctttaaa
gctgccatgaagcaacaggagaagattagagaggatgatcatgacagcaccagggaggag
ggtgagaagaaagagaatagcaaagagccactggaggttcttcttactgctcccacaggt
agagctgcatcacttctgaccaagaaaacctgcttcacagcttataccatgcatcaggtc
ttatggagttacatgcttacgaaaaaacaaccaagtggggagccaataaactggaagttt
gccaacgtccgagtgctggtggtggatgaaggcagtcttgtgtgtgtgcagatcctttcc
tccatcctgtcaatgctcaccaaacatgcacaactacaaaagttcataattctgggagat
ataaggcagctgcccagcattcaaccaggaaatgtcctcaatgacctctttaccagtcta
aagaaggtgaactgggccatcgaaatgtgcaccaaccaccgtgctgaatcagagctcatt
gtccaaaatgctggattaatagcagatatgggtgttactaaaaagtttcataatctaaac
tatgatgctactgtagaactgggtaaaaaacgcacactaccctcacctgacaagaggttc
attgagatccttcttccagaaaaggaaaacgatgatgatctacagaattctataaagtgt
ttgctgagaggcccagcaccagggctggtggatcatgagtcttcacaatttgttgccttc
aagaggactgaatgtgctctgattaatgagctttgctgcaagcattactgtaaccacaac
accaagactcataaaaacaaaatgaactttcagattggcgataaagtatgttgcacaagg
aatggctatgtaactgatatagacaaaaaagatgaagccaaagaccaggaggacgaaatg
gatggaagcaaaagtaaaaaagaacgcttgtgcaatggggagattttctttattacacag
gatgtgacggtaaaggaagacactgcacggaagtgcgttaaattgagatacctgactcta
gataacaagcagggagaaaagctgactgttgaatacagggagctaatgagacagtgtaaa
ctacgacatgcctgggctcgaaccattcacacctttcagggctcagaggaaaagactatt
gtgtatgttcttgacagtggcatccctcaaacttggaaacacgtttatactgcagtcaca
cgaggtcagagccgagtgtatgtcttagcaaagaaggatgggcttgagaacgccatccga
agacacgtcatcaaacgcaacacacgactagaaggccatgttgtgaacttgttacatgaa
ttaggattagccgataaagattttctcagtcaggcaagtcagtctcaattcaactcgcca
aagcgaggttatggatttcagactactcagtctacacacgagtcattgtcaagcccaggt
ccatcccaagcttaccctggaatgaggaatttgaagaatgtgacctgtcaaaacctcact
gatactggtagtatgtttggtgacctcagtttccccaaatcagcaagtccaagtccatgt
aagcgagaaagaaccacggacaactgcaccatgccatccaaacaaatgaaggtggacaca
ccactgggctgctccaagctaaagtccctgtctcttaacagcatcactcccagacagctc
tacccaaaagctccacagtcgcaccaggaccagtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (46)   
   KEGG ORTHOLOGY (1)   
   RefGene (41)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (17)   
   Pfam (17)   
All databases (73)   

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