KEGG   Ictalurus punctatus (channel catfish): 108280164
Entry
108280164         CDS       T04658                                 
Symbol
tmtopsa
Name
(RefSeq) teleost multiple tissue opsin a isoform X1
  KO
K04256  c-opsin
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ipu01009]
    108280164 (tmtopsa)
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:ipu04030]
    108280164 (tmtopsa)
Protein phosphatases and associated proteins [BR:ipu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108280164 (tmtopsa)
G protein-coupled receptors [BR:ipu04030]
 Rhodopsin family
  Vision
   Opsin
    108280164 (tmtopsa)
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srx 7TM_GPCR_Srw 7TM_GPCR_Srsx 7TM_GPCR_Srv 7tm_4 TAS2R
Other DBs
NCBI-GeneID: 108280164
NCBI-ProteinID: XP_017350454
Ensembl: ENSIPUG00000011127
UniProt: A0A2D0T6D2
Position
20:complement(22244678..22272545)
AA seq 489 aa
MASEGLQNKISLSLSLCVCVCVCVYVWDPSNHHTVEQSHSKLLTFSSNEALKQNRMPISV
PFLKSLGSFPRTPSTNTTVSFPHVNSRNCVCVCQCARPAMVWSNGSAGGCCGSPEYVSDT
GAARDSELSLSPTGHSVVAACLGLISTVGFVNNLLALVLFGRHKALRSPINLLLINISLS
DMLVCALATPFSLAASTRGRWLAGRTACVWYGFANSLFGIVSLISLAVLSYERYCTMMCP
AKPDVTNYTKTAVGVVLSWVYSLVWTLPPFFGWSRYGPEGPGTTCSVDWVTKTANNISYI
ICLFVFCLILPFLVIVYSYGKLLHAIKQVSRLKTSTGRKREHRVLLMVLTMVVCYLLCWL
PYGIMALLATFGAPGLVTAEASIVPSVLAKTSTVINPVIYVFMNKQFNRCFRSFLKCDVV
QQSSTSKRWSKADKPVRRTDNNLTFVAASVDHGLAAPSTSRSNEQPPSTDSAKPPALSLV
AHYNGSFCE
NT seq 1470 nt   +upstreamnt  +downstreamnt
atggcctcagaaggattgcaaaacaaaatctctctctctctctctctctgtgtgtgtgta
tgtgtgtgtgtgtatgtgtgggatccgtccaatcaccacacggtggagcagagccactct
aaacttctcaccttctcatcgaatgaagcactaaaacaaaatcgtatgccaatttctgtt
cctttcctaaaatccctgggatctttccctcgaaccccgagcacaaatacaaccgtttca
ttcccgcacgtgaactcgcggaactgtgtgtgcgtgtgtcaatgcgcgcggccggcgatg
gtttggtccaacgggagcgcgggcggctgctgcggatccccggagtatgtctcggacacc
ggagcagcacgcgactccgagctcagcctgagcccgaccggacactcggtggtggctgcg
tgcctcgggctcatctccaccgtcggctttgtgaacaatctgctggcgctcgtgctgttc
ggccgccacaaggcgctgcgctctcccatcaacctgctgctcataaacatctcactgagc
gacatgctcgtgtgcgcgctggccacgccgttcagcctcgccgccagcacgcgcggacga
tggcttgccggacgcaccgcgtgcgtgtggtacggcttcgccaattcgctcttcggcatt
gtgtcactcatctccctggcggtgctttcctacgagcgctactgtaccatgatgtgtccg
gccaagcctgacgtcaccaactacactaaaactgcagtcggagttgtgctgtcctgggtc
tactccctcgtatggacgttgccgccgttcttcggttggagtcgctacggacccgaaggg
cccggaaccacctgctcggtggactgggtgaccaagacggccaacaacatctcctacatc
atctgcctctttgtcttctgcctcatcctaccattcctcgtcatcgtatactcttatggg
aagctgctgcatgctatcaaacaggtgagccgcttgaagacgtccaccggccgaaagcgg
gagcatcgtgtcctcctcatggtcctgactatggtggtatgttacctgctctgctggctc
ccgtatggcatcatggcactgctggctacgttcggagcgccgggtctggtgacagccgag
gctagcatcgtgccctcggtcctggccaagaccagcaccgtcatcaaccccgtcatctac
gtgttcatgaacaagcagttcaacagatgtttccgatctttcctaaaatgcgacgtggtc
caacaaagctccacgtcgaagagatggtcgaaagcagacaaacccgtgagacgaaccgac
aacaacctgacgttcgtggccgcgtcggtggatcacggattagcagcacccagtacctca
cggagcaacgagcagcccccgtcgacagactcggccaaaccgccggcgctgtccctcgtg
gctcattacaacggctctttctgcgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (64)   
   KEGG ORTHOLOGY (1)   
   RefGene (59)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (82)   

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