KEGG   Ictalurus punctatus (channel catfish): 108280423
Entry
108280423         CDS       T04658                                 
Name
(RefSeq) uncharacterized protein LOC108280423 isoform X1
Organism
ipu  Ictalurus punctatus (channel catfish)
SSDB
Motif
Pfam: NACHT NLRC4_HD2 FISNA NOD2_WH nSTAND3 AAA_25 DUF5765 DUF3839
Other DBs
NCBI-GeneID: 108280423
NCBI-ProteinID: XP_017350865
Ensembl: ENSIPUG00000012956
UniProt: A0A2D0T899
Position
20:15914233..15969712
AA seq 1564 aa
MQMEQYDREMCTIEERSAQSTDHLKVTIVAQGGNVFSPIFHNVQGAGCMTLTQSVGGANL
SECEARDMTSVMTEYKESVVSMYAYTREYTSCPGEHVLLADRYVDPLIIQRHRVKKEREK
EMCSKGKDFFNLRTYDTNQSTGIDDLFSQEDGPNNECPKAVILQGNSGNGKSFMAQKIIL
DWAKGDLFAGIFDVVFHLRCSELNAISGDISLVELLNCSEEMTQILKDKEKRVLFLVDGF
DELRRSLPEKALPIRVDIQAKPAAILSSLLRGIMLKESFLLITTRSTSTKKLGKLLKCPQ
RFTEIIGFSEKGVQEYFQKFFEDKDLSNQVHDQVKTNEALYTACFSPVMCWLICNVFKQK
HNMGTRMTSGLKSTTSIFIDFVFILLEHHCQDLNQTEQFNMLKNLGQLAEEGMLKGKILF
ERQFVPEVILNLVGLPFLCTFHHREGTHVKEMFSFLHLSFQEFFAALFYVLLDKAEAETK
INQLLSSVSDLFKMSKNSHLLPVIQCLFGLSNKKVINLINEKHQHVVSRKIGSLLEKWMH
TFVKNDMMTHFSSFTLHCLYEVNDKNVVMNIMKIWETGRAGVNILLSSSQMTDYRAAAYC
LQFCRRIRSLYLCASTMQTLKMMETALSKCYELHLTVNYVSDDDAVYLISAMGKGKHLQC
LRLEDGSLSDHSVQMIMSTLPKQRSVVDVHLTVKAINHNNTEILMNFHKCLKASGQFSLK
VATLKNQEESLCSHFAIHNYNLYEITIKHNVVESSVKCGLALVYLSVAFDSVISHNDMKH
LLRISYNLKEIPQFEEHVDALLSFLHSIPGLTTVKLDAKNLSLKSASKILTFSQNRPSVG
RHSIRFDVDSLRGINEEDICSLSLFTDDLVYVDGVILHLKLKVHSSSLQDAYETEFKAIL
LQLSLTFPPMEGATVNWEVLFKMSSHLMKSNQRTCFSLDKQMSTIFSVLQSVPSLTEVNL
HLRSLPENWAAEMIYFLQACSSLPFFELRVGNGGETLGMIRGEALRSSDKNSILSFGCRH
LDYHDYHGWISPPGYMAGDVHSVLPCITLTITNNTDFFNNSWTTFFHHYNQLKAMTELCP
EYDQCLDGLLSVMNTIPALKEVELALRFFTAHVASSILQLFQTSSSLCKIDVMLSRQIRR
DRADEQNAREDWKSFQSDDEGDSVYSDISDSNRSAEFSSGSYGTDVEDYGDTVYLPRQLS
LNSEIENNDLDLCSELRVRKNARNECKLSLRCDGSNPDTKAVFAYISVIVSEYSGDTEIK
WGSFFQSYYETKGLTERNPYFAEKTDALLSFLHVVPGLEEVEFGIHSLTESWAPRILFLC
HANPNIRRIRLLLENAQQNDQDSACSSLTIKRNFTDMVTLKIDMLSITTIPSLIHLKLPC
SEISNLDGAGLLYRLKCLEGLNDTSQEYNMQLNELISFLRSVPNLQKLKLHIENLTTIWV
KRVLSLKTCHSLRKIFVTTLSDDMLMEEAISELKKNWTCQECVVVITGLRCSNPTAKCSK
QNWHQECNKNMKLSFCGGQYSEEPLMYGQRETDSESEECKYYTFECYPDVIEVDEEEDGD
VFII
NT seq 4695 nt   +upstreamnt  +downstreamnt
atgcagatggagcagtatgatagggagatgtgtactatagaagaaagatctgcacaatca
actgaccacttaaaagttactattgtggctcagggtggaaatgttttttctccaattttt
cataatgttcaaggagcagggtgcatgaccctcacacaaagtgttggtggtgcaaactta
tcagaatgtgaggccagagatatgacctctgtgatgacagagtataaggagtcagtagtg
tccatgtatgcatacactcgggaatatacctcctgtcctggtgagcatgtgctcctagca
gatcgttatgttgatccactgatcattcagagacacagagtgaagaaagagagagaaaaa
gaaatgtgctccaaaggaaaggactttttcaacctcaggacatatgataccaaccaaagc
actggtattgatgacttatttagtcaagaggatggtccaaacaatgaatgtccaaaagct
gtcattctccaaggaaattctggaaatggaaagtctttcatggcacaaaaaatcattctg
gattgggccaagggagatctctttgcagggatctttgatgtagtctttcaccttagatgc
tcagagcttaatgctatttctggggacataagtctggtggaacttctaaactgcagtgaa
gaaatgactcagatcctaaaagataaggaaaagagagttcttttcctggtggatgggttt
gatgagctcagacgttctctgcctgaaaaggcattgcctatcagagttgatatccaggct
aaacctgctgccatcctgagctcccttttgaggggaatcatgttaaaagagtccttcttg
ctgatcactacgaggtcaacatctacaaaaaaattaggaaaactgctcaagtgtccacaa
cgctttactgagattattggcttttctgagaagggagtgcaagaatattttcaaaagttc
tttgaggacaaggatctttcaaatcaagtgcatgaccaagtaaagacaaatgaggctctc
tacacagcttgcttcagccctgtaatgtgctggcttatctgcaacgtctttaagcaaaag
cacaacatgggtacaagaatgacaagtggattgaaaagtaccacctccattttcattgat
tttgtatttatcctgcttgaacatcattgccaagatttaaatcaaactgaacagtttaac
atgctgaagaaccttggccagcttgctgaagaaggaatgcttaaaggcaaaatcctattt
gaaagacaatttgttcctgaggtgatcttaaatctagttggcctccctttcctctgcact
tttcaccacagagagggaactcatgtgaaggaaatgtttagttttttgcatcttagcttt
caagagttctttgctgcactcttctacgtcttactcgacaaggcagaggctgagacaaaa
atcaatcaactgctatcatcagtttcagatctgtttaaaatgtccaaaaattcccatttg
ctaccagtcatccaatgtctttttggactctccaacaagaaagtgatcaacttaatcaat
gaaaaacatcaacacgtagtatctcggaaaattggttccctgctggagaaatggatgcac
acatttgtaaaaaatgatatgatgacacatttcagcagtttcacccttcactgcttgtat
gaggtcaatgacaagaatgttgttatgaatattatgaaaatttgggaaacagggagggct
ggggttaacattttgctgagttcttcacagatgacagactaccgtgcagcagcatactgt
ctgcagttctgtagacgcatcagaagcctgtatctgtgtgcaagtacaatgcagactcta
aaaatgatggaaacagcactgagcaaatgttatgaactacatttaacagtgaattatgtg
tcagatgatgatgcagtctatctgatctctgctatgggaaaaggaaaacatcttcaatgt
ctgaggttagaagatggtagtctgtctgaccacagtgtacagatgatcatgagcactttg
cccaagcaaagatctgttgttgatgttcatctcacagtgaaggccattaatcacaacaac
actgaaatcctcatgaactttcacaaatgtctgaaggcttcaggacaattcagcttgaag
gtggctactttaaagaaccaagaggaaagcctttgctcacattttgcaatacataattat
aacttgtacgaaataactattaagcacaatgttgtggaatcctctgtgaaatgtggactg
gctcttgtgtacctctcagtggcctttgactcagtgatatcccacaatgacatgaaacat
ctccttcggatatcatataatcttaaagaaattcctcagtttgaggagcatgtagatgca
cttctgtctttcctccattctatacctggtttaactacagtgaagctggatgctaaaaat
ttgagtctgaaaagtgcttcaaagatcctcactttctcccaaaacagacccagtgttgga
cgtcattccattcggtttgatgtggatagtctcagaggtatcaatgaggaggacatctgc
tctctgtcattgttcacagatgatcttgtttatgtggatggtgtgatactacacctgaaa
ttaaaagtgcacagttcaagtcttcaggatgcatatgaaactgaattcaaagcaatactc
ctgcaactctcactgacatttccacctatggagggtgccactgttaactgggaagtttta
ttcaaaatgagtagccacctgatgaaatcaaatcaaagaacatgtttctccttggacaag
caaatgagcactatcttttcagttctccaatctgtgccatctctaacggaggttaattta
cacttgagaagcttacctgagaattgggcagctgaaatgatttattttctccaggcctgt
tctagtctaccattctttgaattgagagtgggcaatggaggtgaaactctgggaatgatc
agaggagaagccctgaggtcttctgacaaaaattccatactgtcttttggatgccgtcat
ttggattatcatgactatcacggctggatatcaccaccaggttatatggcaggtgatgtt
cacagtgtgctgccctgtatcaccctcaccataacaaacaacacagatttcttcaacaat
tcttggacaacattcttccatcattataatcagcttaaagcaatgactgagctatgtcca
gagtatgatcagtgcctggacggattgttatctgtcatgaacactattcctgctctgaaa
gaggtagagctggcattgagatttttcacagctcatgttgcttccagcattctgcagctt
tttcagacctcttccagtctgtgtaagattgatgttatgctgtcaaggcaaataaggaga
gatcgtgctgatgaacagaatgccagggaagattggaaaagtttccagagtgacgatgaa
ggggacagtgtctattcagatattagtgactcaaacagatcagcagaattcagttctggg
agctatggcacagatgtggaggattatggggacactgtttacttaccaagacagctcagt
ttgaattcagaaatagaaaacaatgacttggatctctgctcagagctaagagtaaggaaa
aacgccaggaatgaatgcaagttgtccttgagatgtgatggctccaatcctgatacaaaa
gcagtttttgcatacatttcagttattgtatctgaatattcaggggacactgaaatcaaa
tggggaagcttctttcagtcttactatgagactaaagggttaactgagagaaacccatac
tttgctgagaaaacagatgccttgctgtctttcctgcatgttgtacctggactggaggag
gtggaatttggcatacacagtctaacagagagctgggctcctaggatcctctttctctgt
catgcaaaccccaatattcgtagaatccgtctgctgttggaaaatgctcagcaaaatgat
caggacagtgcctgctcatctttaaccattaaaagaaacttcacagacatggttactttg
aaaatcgatatgctaagcatcaccactataccatccctcattcacctcaagttaccatgt
tctgagatcagcaacctcgatggagctggtcttctttacagactgaagtgccttgagggt
ttaaatgatacatcccaagagtacaacatgcaattaaatgagctgatctcattcctccgc
tctgttcctaaccttcagaaattgaaattgcacattgagaacctaactacaatctgggtt
aaaagggtgctttccttgaaaacctgccacagtcttagaaagatctttgtgactacctta
tcagatgacatgttaatggaggaggcaatctcagaacttaaaaaaaattggacatgccag
gagtgtgttgtggttattacaggactgagatgcagcaaccctactgcaaaatgttcaaag
caaaactggcatcaagaatgcaacaaaaatatgaaactctcattctgtggaggccagtat
tctgaggagcccttgatgtatggacagcgtgagacagacagtgagagcgaagagtgtaaa
tattacacatttgagtgttatcctgatgtaatagaggtagatgaagaggaagatggagat
gtcttcataatttga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (8)   
   UniProt (1)   
   RefSeq(pep) (7)   
DNA sequence (14)   
   RefSeq(nuc) (10)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (73)   

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