KEGG   Ictalurus punctatus (channel catfish): 108280571
Entry
108280571         CDS       T04658                                 
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1 isoform X1
  KO
K04446  nuclear factor of activated T-cells, cytoplasmic 1
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04010  MAPK signaling pathway
ipu04020  Calcium signaling pathway
ipu04148  Efferocytosis
ipu04218  Cellular senescence
ipu04310  Wnt signaling pathway
ipu04625  C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    108280571
   04310 Wnt signaling pathway
    108280571
   04020 Calcium signaling pathway
    108280571
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    108280571
  09143 Cell growth and death
   04218 Cellular senescence
    108280571
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    108280571
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ipu03000]
    108280571
Transcription factors [BR:ipu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) NF-AT
    108280571
SSDB
Motif
Pfam: RHD_dimer RHD_DNA_bind TIG
Other DBs
NCBI-GeneID: 108280571
NCBI-ProteinID: XP_017351185
Ensembl: ENSIPUG00000003388
UniProt: W5U9R6
Position
20:3077125..3139135
AA seq 879 aa
MPAPACTRPDSSANFTRPALGKRRGPELCCSAQFSMKSAEEEAFSYTPNVSLSLPLGMAN
PCLASQYHSLQSSPVISVSSCHQASYGLHESAMAPNYYFPGLRPNGAPPLERPRIEITTY
GQMPEEEVEESGTMGPVAKRVNIVTLTLPSADGYRDPSSLSPASSCNSEASYESGFYNYE
NSPQNSPWQSPCVSPKGTSISMLSCPPHGHAPGPSPRHSPSTSPNDDIGSHGKRKYSFNG
TPYGHASGISPNHSPGASPQGSPRLEENWLGTTNQYTNSAIVAAINALSTDGLPDLGDGV
PNKSRKTSVEHNSSMSLKVEPANDDLGTDLGQEDYTNSNRMPFKKESYCSGFLDVPPHPY
SWPKPKPYLSPSLPALDWQLPSCSGPYNLQIEVQPKSHHRAHYETEGSRGAVKAPSGGHP
VVQLYGYMESEPLTLQLFIGTADDRLLRPHAFYQVHRITGKTVSTASHEAMQSNTKVLEI
PLLPENNMRAIIDCAGILKLRNSDIELRKGETDIGRKNTRVRMVFRVHINQPNGRTVSLQ
AASNPIECSQRSAQELPMVDKQSLDSYPASGGKRMLLSGHNFLPESKVMFVEKAQDGHHV
WETEANVDKDSRKSTSLVVEIPPYRNQRISSAVPVSFYVCNGKRKRSQYQRFTYLPCNVP
MIKTEPADDYESRMSIHANPYFGQQRLPTMMPLDDPEPCMVASYAPCASRPTPMLCSSPS
SSPKLHDLSPVPFPKCLSNSPTHSTMPGGMASMQDPPTHHGLALPSSPDPTSLAMHHPQG
SPHLGSPSYHPLYPNSSPSSSPNSHPSTPGAATESPYLATFGSTQPGGSSPTLLADDHAS
PVLPVTIKQEPQELDQMYLDDVNEIIRNDLSCTSAHGHS
NT seq 2640 nt   +upstreamnt  +downstreamnt
atgcccgcgcctgcgtgcacgcgtcccgattcgagcgccaacttcacacggccagctttg
ggcaaacggagaggacccgagctctgctgctccgctcagttcagcatgaagtctgcggaa
gaagaggcttttagctacacgccaaatgtgagtctgtctctcccacttggcatggccaat
ccctgcctggcatctcagtaccacagtcttcaatcaagccccgtcatttcagtctcatca
tgccaccaagcgagctacggactccacgagagcgccatggctccgaactactacttcccc
gggctccgtcccaatggcgcaccccctttggaaaggccacgcattgagatcactacttat
ggccagatgcctgaggaagaggtggaggaaagtgggaccatgggccctgtggctaagcga
gtcaatatcgtgaccttgaccttgcccagtgctgatgggtaccgcgacccaagcagtctg
agtccagcaagtagctgcaactctgaggcttcatatgagtctggtttctacaactatgaa
aattcaccccagaactcaccgtggcaatcgccctgtgtctcgcccaaaggcacatccatt
tctatgctgtcttgcccccctcatgggcatgcccctggtccatcccctcgtcactcccct
tccacctctcccaacgatgacatcggaagtcatggcaagcggaagtatagcttcaacggc
accccttatgggcacgcatcaggcatctcgcccaaccactcgcccggggcttcgcctcag
ggttcaccaaggcttgaagaaaactggctgggaaccactaaccagtacaccaattcagcc
atcgtggcagccatcaacgccctcagtacagacggcttacccgatctcggggatggtgtt
cccaacaagagccggaagaccagcgtagagcacaattccagcatgagcctgaaggtggag
ccggcaaacgacgatctaggcacggatctcggccaggaggactataccaactcaaaccgt
atgccattcaagaaggagagctattgctcaggattcctggatgttcctcctcacccatac
tcgtggcccaagcccaaaccttacctcagcccgtctctgccggctcttgattggcagctg
ccgtcctgctcaggtccttacaatctgcagatcgaggtgcagcccaaatctcaccaccgt
gcccactatgagacggagggcagccgaggggcagtgaaggccccgtcaggagggcaccct
gtggtgcagctttacggctacatggagagcgagccactaacactccagctcttcattggc
acggcagatgaccgacttctgcgaccgcacgctttctaccaggttcaccgcatcaccggc
aagactgtctccactgccagccacgaggccatgcaatccaataccaaggtgctggagatc
cctctgctgcctgagaacaacatgagagccataatcgactgtgctggaatcctgaagctc
cgaaactcagacatcgagctgaggaagggcgagacggacatcggacgcaaaaacactcgc
gtccgaatggtgttccgcgtccacatcaaccagcccaacggcaggaccgtgtctttacaa
gccgcgtccaaccccatagagtgctcccagcgctcagcacaggagctgcctatggtggac
aagcagagcctggacagctacccagcatcaggagggaaaaggatgctcctaagcggacat
aacttcctacccgaatccaaagtcatgtttgtggagaaggcccaagatggacatcatgta
tgggagacagaagccaacgtggacaaggattctcgcaaatctacttctttggtggtggag
atccctccttaccgcaatcagaggatatccagcgccgtgcctgttagcttctacgtctgc
aacggcaagaggaagaggagccagtatcagcgctttacctacctgccgtgcaacgttccg
atgataaagacagagccggctgatgactatgagtcccggatgtccatacatgcaaatccc
tacttcggccagcagagactgcctaccatgatgcctttggatgaccctgagccctgcatg
gtggccagctatgccccctgtgcgtctcgccccacccccatgctatgctcttcccccagc
tctagccctaagctccatgacctttcgcctgtaccctttcctaagtgcctgagcaacagc
cctacacactccaccatgcctggaggtatggcatccatgcaggatcctcccacccaccat
gggctggccctgcccagctcccctgaccccacctccctcgccatgcatcaccctcagggt
agtccacaccttggcagcccttcataccaccccctctaccccaacagtagtccctcctcc
tctcctaactcccatccctcaacgcccggggctgcaactgaaagcccttatctggccacc
tttggctccacccagcccggaggaagctcacccaccctgttagcagacgatcacgcctcc
cctgttctgcctgttaccatcaaacaagaaccgcaggagctcgaccaaatgtatctggat
gatgtcaacgagattatcaggaacgacctatcctgcacttccgctcacggtcactcatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (63)   

Download RDF
DBGET integrated database retrieval system