KEGG   Ichthyobacterium seriolicida: JBKA6_1205
Entry
JBKA6_1205        CDS       T05228                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ise  Ichthyobacterium seriolicida
Pathway
ise03030  DNA replication
ise03430  Mismatch repair
ise03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ise00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    JBKA6_1205
   03430 Mismatch repair
    JBKA6_1205
   03440 Homologous recombination
    JBKA6_1205
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ise03032]
    JBKA6_1205
   03400 DNA repair and recombination proteins [BR:ise03400]
    JBKA6_1205
Enzymes [BR:ise01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     JBKA6_1205
DNA replication proteins [BR:ise03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     JBKA6_1205
DNA repair and recombination proteins [BR:ise03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     JBKA6_1205
SSDB
Motif
Pfam: RNase_T ExoX-like_C RNase_H_2 Rv2179c-like DNA_pol_B_exo2 QSregVF_b
Other DBs
NCBI-ProteinID: BAV95218
UniProt: A0A1J1DZ77
Position
complement(1560370..1561140)
AA seq 256 aa
MDLNITKPICFFDLETTGTNISKDRIIEISILKILVDSTQESKTWLVNPTVVIPEESIKV
HNITNEDVADKPTFKDILPEIKKMIKNSDLCGYNSNKFDIPLLAEEFLRAGEDFSMKNRK
SIDVQNIFHKMEQRTLSAAYKFYCKKELSNAHSAQADTQATYEILKSQLDHYPELKNEMD
FLSEFSQHNRSVDLAGFIGLDDQDFEIFNFGKYKGLRVLEILEKDKGYFSWIQNSDFPLY
TKKILTEIRLKNFNKK
NT seq 771 nt   +upstreamnt  +downstreamnt
atggacttaaacataactaaacccatttgttttttcgacttagaaacgacaggaactaat
atttctaaagacagaataatagaaatatctatactaaaaatactagtcgactcaactcaa
gagagtaaaacttggttggtaaatccaactgtagtaatccctgaagagtccattaaggta
cacaatataacaaatgaagatgtggctgataaacccacgtttaaagatatattgccagag
ataaaaaaaatgatcaaaaattctgacctatgtggctataattctaataagttcgacata
cctctcttagccgaggaatttttaagagctggagaagatttcagcatgaaaaatagaaag
agcatagatgttcaaaatatcttccacaagatggaacagagaactctctcggctgcttat
aagttctattgcaaaaaagaactatcaaatgcacattctgcacaagccgatactcaggct
acgtacgaaatcttaaaatctcaattagatcactacccagaattgaaaaatgaaatggac
tttttaagtgaattttcacaacacaatagaagtgtagatctagctggattcataggttta
gacgatcaagattttgaaatattcaactttggaaaatacaaaggactcagagtattggaa
atattagaaaaagacaaaggctatttctcctggatacagaactctgattttccactttac
acaaaaaaaatattgaccgaaatacgcttaaaaaatttcaataaaaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (28)   

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