KEGG   Isoptericola variabilis: Isova_2595
Entry
Isova_2595        CDS       T01520                                 
Name
(GenBank) helicase domain-containing protein
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
iva  Isoptericola variabilis
Pathway
iva03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:iva00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Isova_2595
  09124 Replication and repair
   03420 Nucleotide excision repair
    Isova_2595
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:iva03021]
    Isova_2595
   03400 DNA repair and recombination proteins [BR:iva03400]
    Isova_2595
Enzymes [BR:iva01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Isova_2595
Transcription machinery [BR:iva03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     Isova_2595
DNA repair and recombination proteins [BR:iva03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     Isova_2595
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom AAA_22
Other DBs
NCBI-ProteinID: AEG45298
UniProt: F6FTD4
Position
2839805..2841484
AA seq 559 aa
MTDGPLIVQSDKSILLEVDHPRADDARRAIAPFAELERAPEHVHTYRLTNLGLWNARAAG
HDAEQVVDTLLEYSRYPVPHALLVDVAETMARYGRLRLVSHPVHGLVLEATDKAVLAEVL
KSKRTTGMVGERLDDETVVVHPSERGHLKQALVKLGWPAEDLAGYVDGEKHPIALAPVTV
PRTPDEQPKPWEMRPYQAQAVDGFWHGGSGVVVLPCGAGKTIVGAGAMAKSGTTTLILVT
NTVSARQWRDELVRRTTLTEDEIGEYSGARKEIKPVTIATYQVLTTKRKGVYSHLELLDA
RDWGLIVYDEVHLLPAPIFRMTADLQARRRLGLTATLVREDGREDEVFSLIGPKRYDAPW
KDIETQGYIAPADCVEVRLTLPEHERMVYATAEPEDKYRLAACAPGKNRVVERIVASHPD
DQVLVIGQYLDQLEELSEHLDAPLITGATTVRERQRLFQAFRSGEISRLVVSKVANFSID
LPEASVAIQVSGSFGSRQEEAQRLGRIMRPKADGRTAHFYAVVARDTVDQEFAAHRQRFL
AEQGYAYRIVDAEDLDTVV
NT seq 1680 nt   +upstreamnt  +downstreamnt
atgacggacggcccgctcatcgtccagagcgacaagtcgatcctgctcgaggtcgaccac
ccgcgcgccgacgacgcgcggcgcgccatcgcgccgttcgcggagctcgagcgcgcgccc
gagcacgtgcacacctaccgcctgacgaacctcggcctgtggaacgcgcgcgccgcgggg
cacgacgcggagcaggtcgtcgacacgctcctcgagtactcgcggtacccggtgccgcac
gcgctgctcgtggacgtcgccgagacgatggcgcgctacggccggctgcgcctcgtgtcc
cacccggtccacgggctcgtgctcgaggccaccgacaaagccgtcctcgccgaggtgctc
aagtccaagcggaccacggggatggtgggcgaacggctcgacgacgagacggtggtcgtc
caccccagcgagcggggccacctcaagcaggcgctggtcaagctcggctggccggccgag
gacctcgcgggctacgtcgacggcgagaagcacccgatcgcgctcgcgccggtcacggtc
ccgcggaccccggacgagcagccgaagccgtgggagatgcggccctaccaggcccaggcc
gtcgacgggttctggcacggcggctccggcgtcgtcgtcctgccgtgcggcgcgggcaag
acgatcgtcggcgcgggcgcgatggcgaagtcgggcacgacgacgctcatcctcgtgacc
aacacggtcagcgcccggcagtggcgcgacgagctcgtgcgccgcacgacgctgaccgag
gacgagatcggcgagtactcgggcgcccgcaaggagatcaagcccgtcacgatcgcgacc
taccaggtgctcacgaccaagcggaagggcgtctacagccacctcgagctgctcgacgcg
cgcgactggggcctcatcgtctacgacgaggtgcacctgctgcccgcgccgatcttccgc
atgacggcggacctgcaggcccggcgccggctcgggctcaccgccacgctggtgcgcgag
gacggccgcgaggacgaggtgttctcgctcatcgggcccaagcgctacgacgccccgtgg
aaggacatcgagacgcagggctacatcgcgcccgccgactgcgtcgaggtccgcctcacg
ctgcccgagcacgagcgcatggtctacgcgacggccgagcccgaggacaagtaccgcctc
gcggcgtgcgcgccgggcaagaaccgcgtcgtcgagcggatcgtcgcgtcgcaccccgac
gaccaggtgctcgtcatcgggcagtacctcgaccagctcgaggagctgtccgagcacctc
gacgcgccgctcatcacgggcgcgacgacggtccgcgagcgccagcgcctgttccaggcg
ttccgctcgggcgagatctcgcgcctcgtcgtgtcgaaggtcgcgaacttctcgatcgac
ctccccgaggcgtccgtcgcgatccaggtgtccgggtcgttcgggtcgcggcaggaggag
gcccagcgcctcgggcgcatcatgcggcccaaggccgacggccgcaccgcgcacttctac
gcggtcgtcgcgcgcgacaccgtggaccaggagttcgccgcgcaccggcagcggttcctc
gccgagcaggggtacgcgtaccggatcgtcgacgccgaggacctcgacacggtcgtctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (24)   

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