KEGG   Janthinobacterium sp. B9-8: VN23_00670
Entry
VN23_00670        CDS       T04271                                 
Name
(GenBank) hypothetical protein
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
jab  Janthinobacterium sp. B9-8
Pathway
jab03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:jab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    VN23_00670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:jab03400]
    VN23_00670
Enzymes [BR:jab01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     VN23_00670
DNA repair and recombination proteins [BR:jab03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     VN23_00670
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_30 Biotin_carb_C AAA_22 AAA_11 ResIII
Other DBs
NCBI-ProteinID: AMC33235
UniProt: A0A0X8GJB3
Position
complement(153671..157333)
AA seq 1220 aa
MNLRPLNLFEMPLAGPHMIEASAGTGKTWTITGLYTRLVIEHGLKVPEILVVTFTEAATA
ELRDRIRGRLAEVLESFEGEEALDPFCEQLLIQHADRRTEVMRRLQRAIASLDEAAIHTI
HAFCQRVLIQSAFESGADFGMEILSDTGPVLDEIAADFWREQVYPADAIYTEYLLKSKAS
PEEWLRVVYGHLGQPLLHTVELGVAADTAELSAALPAAFENYRQLWNEHSAVIKEMLLGL
SASKALKQTSYKPEQLEKIFLLIDDHIAGNGGWQDIDSKELVKLSSSKLISGTAKGKTPP
EHGFFEAVELLASLINDLSTACELRQKQGLAELRRRCDIELPERLARRQQLSFNDLLLRV
WQGLTAEGGERLAIAMRRRYKAALIDEFQDTDGIQYDIFSRVFADGSTPLFLVGDPKQAI
YSFRGADIHAYHQAEALVDAKESLDTNQRSVPALVTAVNTLFERPSEAFVDPHVSFSAVK
AASKPRPELIVDGENEAPADDEGKSAPFRFQFLPEPEGVSEKGVQISWPKETANHLAAQI
TAQEIERLLRLAGEGKAKLAGADKERPLSGGDMAVLVPDRFRAKAMQDALTQLGVPSVLR
VRDSVWESQEAVELYTVLAAISEPAKQGLVRAALISTLLGNNAATLLRLEINGWDQIADA
FAHWKKLWQTQGLIPMFREWLEYQGLDGRNVAQRLLSLSDGERRLTNLLQLAELLQAHKA
TGLEQHLAWFSRQNKNAGDEALLRLESDEDRVRIVTLHASKGLEYPIVFCPFLWDGRLLG
KHTEAVRYHQNDKAWLDLGSDDFDEHKDSAKREAFEEKLRLLYVGLTRARNRCYIAWGNI
GLKDGRGYAISDGLSQSAMAWLLHPLAGEHGDVLEAQKEHLKAYDHETLLGEITAMCEQQ
PEVFALHDAPSASGPGLKTAPSEPLVFKPYLGKKLYPTWRVASFSGMTAHNHSEGPDRDS
ASNAPEADSSAAPGRSIFSFPEREAAATVAGTCLHAILEEWDWQDADTLLATTAKALEHH
GIPEHWLDVVSQMVQDTVSARLDGKALTLASIPPTARVAEMEFTYSVSHCQPERLIAALQ
HPSLPIEFRAAASTLDFFHINGFLRGFIDLVFEYENAFYVLDYKSNWLGNNVADYAPAKL
IPAMAQHHYYLQYLIYSAAVRRFLRQRLPSFTDDQFGGVYYLFMRGLGKQDGQNGVYFSR
PSMELLDDIEVALMGVAAKT
NT seq 3663 nt   +upstreamnt  +downstreamnt
atgaatcttcgccccctaaatctgtttgagatgccattagctgggccgcatatgatcgag
gccagcgcggggacggggaagacttggacgattacgggtttatatacaaggctggtgatt
gagcacggcttaaaagtgccagagattctggtggtgacctttaccgaagcagccaccgcc
gagctgcgcgatcgcatccgtgggcggctcgccgaggtgttggaatctttcgagggggaa
gaggcgcttgatccgttttgtgagcagctgctcattcaacacgcagaccggcgaaccgag
gtgatgcgccgtttgcagcgcgccattgccagtctggacgaggcggcgattcataccatt
cacgctttttgccagcgggtgctcatccaatccgcctttgaaagcggcgctgattttggt
atggagattctcagcgataccggcccggtgctggatgaaattgccgcagatttttggcgc
gagcaggtctaccccgccgacgcgatttacaccgaatacctacttaaaagcaaagccagc
ccagaggaatggctgcgggtggtctacggccatttaggccagccactactgcataccgtg
gagctgggagtcgctgccgatactgcagaattaagcgccgccctgcctgctgcttttgaa
aactaccgccagctttggaacgagcattcagcagtcattaaggaaatgttgctggggctg
tctgccagcaaggccttaaagcaaaccagctataagccagagcaattagaaaaaatcttt
ttgctgatcgatgaccatatcgcgggcaatggtggctggcaggatatcgacagcaaggag
ctggtgaagctcagcagcagtaagctcatcagcggcaccgccaagggcaaaacgccgccc
gagcatggtttctttgaggcagtggaattactggccagcttaattaatgatctgagcaca
gcttgcgaattgcggcaaaaacaaggcttggccgagctgcgccgccgctgcgatatcgag
ctacccgagcgcctagcccgccgtcagcaattatcctttaacgatcttttgctgcgcgtg
tggcaaggcctgactgcggaaggcggcgagcgcttagccatagccatgcgccgccgctac
aaggccgcgctgattgatgagtttcaggataccgacggcattcagtacgatattttctcg
cgcgtgtttgcggatggcagcacgccgctgtttttggtgggggacccaaagcaggcgatt
tatagctttcgcggcgcggatattcacgcctatcaccaagccgaagccttggtggatgcc
aaagaaagcttggataccaatcagcgctcggtgcccgctttagtgaccgccgtaaatacc
ctgtttgagcggcctagcgaggcttttgttgatccgcatgtcagctttagcgccgttaaa
gcggcgagtaaacctcggccagaattgattgttgatggcgagaatgaggcgcctgctgat
gatgaaggaaagagcgccccttttcgcttccaatttttgcctgagcccgaaggcgtctca
gaaaaaggcgtgcaaatcagctggcctaaagaaaccgccaatcatctggccgcccaaatc
accgcacaagagattgaaaggctgctgcgtttggctggggaaggcaaagccaagctggcg
ggggcagataaagagcggccactctcgggcggcgatatggccgtgctggtgcctgatcgt
tttcgggcgaaagccatgcaggatgcgctcacccagctgggcgtgccgagcgtgctgcgg
gtaagagatagcgtttgggagtcgcaagaggctgtcgagctttataccgtgctggctgcc
attagcgagccagccaagcaagggctggtgcgtgccgcgctgattagcaccctgctaggc
aacaatgccgccaccctgctgcgcctagaaatcaacggctgggaccagattgcggacgcc
tttgcccactggaaaaaactctggcaaacgcagggtttaatcccgatgtttagagagtgg
ctggaataccaggggttggatgggcgcaatgtggcgcagcgcttactttctttgagcgat
ggcgagcggcggctaactaatctattacagctagccgagctattgcaagcgcacaaagcc
accggcctagagcaacacttggcatggtttagccgccagaataaaaacgcaggcgatgaa
gccttattgcgcctagaaagcgatgaagaccgcgtgcgcatcgttaccctgcacgccagc
aagggccttgaatatcccatcgtgttctgcccgtttttatgggatggccgcctgctgggc
aagcacaccgaggcggtgcgctatcatcaaaacgacaaagcatggctggatttaggcagc
gatgattttgatgagcataaagacagcgccaaacgggaagcctttgaagaaaagctgcgc
ctactttacgtgggcctgacccgagcgaggaatcgctgctatatcgcgtggggcaatatc
ggcctgaaagatggccgaggctatgcaattagcgacggcctatcgcaatcggccatggct
tggctgctgcacccactcgctggggagcatggtgatgtattggaagcgcaaaaagaacat
ctaaaagcttacgatcatgagaccctgctgggtgaaattacggcgatgtgtgagcaacag
ccagaagtctttgccctacacgatgcgcctagcgctagcgggcccggccttaaaacggcc
ccttccgagccacttgtgtttaagccctaccttggaaaaaagctctatcccacatggcgg
gttgccagcttttctggcatgaccgcgcacaatcattccgaagggccagatagagatagc
gccagcaatgcgccggaagccgattcatccgcagcccccggcagatccatattcagcttt
ccggaaagagaggccgccgccaccgtggccggtacttgtctacacgctattttagaagaa
tgggattggcaagatgcagatacgctactcgccaccaccgccaaagccctagagcaccac
ggtattccagagcattggctagatgtggtcagccagatggtgcaagacaccgtttctgcg
cggctcgatggcaaggcgctgaccttagccagcatcccgcccacagcccgcgtggcagaa
atggaattcacctatagcgtaagccactgccagcccgagcgcctgattgccgcgctgcaa
catccatcgctgcctatcgagtttcgcgcagccgccagcacgctggatttcttccatatc
aacggctttttaagaggctttatcgatctggtgtttgaatacgaaaacgccttctacgtg
ctcgattacaaaagcaattggctaggcaataacgtggccgactacgcccccgctaaactc
atccccgccatggctcagcaccactattatctgcaatacctgatctattcagcggcagtg
cgccgcttcctgcgccagcgcttgcctagctttactgacgatcaattcggcggcgtgtac
tacctgtttatgcgcgggctgggcaaacaagacggacaaaacggcgtgtacttcagcaga
ccaagcatggaattgctggatgatattgaagtagctttgatgggggtggcggcaaaaacc
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (20)   

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