KEGG   Janthinobacterium sp. B9-8: VN23_18965
Entry
VN23_18965        CDS       T04271                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
jab  Janthinobacterium sp. B9-8
Brite
KEGG Orthology (KO) [BR:jab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:jab03032]
    VN23_18965 (gyrB)
   03400 DNA repair and recombination proteins [BR:jab03400]
    VN23_18965 (gyrB)
Enzymes [BR:jab01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     VN23_18965 (gyrB)
DNA replication proteins [BR:jab03032]
 Prokaryotic type
  DNA Topoisomerases
   VN23_18965 (gyrB)
DNA repair and recombination proteins [BR:jab03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      VN23_18965 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3
Other DBs
NCBI-ProteinID: AMC36519
UniProt: A0A0X8GQV1
Position
4195274..4197685
AA seq 803 aa
MSEQQEYGADSIKILKGLEAVRKRPGMYIGDTQDGSGLHHMVFEVLDNAIDESLAGHCDT
IKVIIHADNSISVEDNGRGIPTDIKEDDEFKRSAAEIVMTELHAGGKFDQNSYKVSGGLH
GVGVSVVNALSDWLKLTIRRNGKAHSMEFRQGEAVSPLAVIGDTERRGTEVHFMASIETF
GLIEYHFEILAKRIRELSFLNNGVKIQLIDRSHGKEENFAYEGGVSGFVQYMNRNKSVLH
PHIFHAVGEKDGMIVEVAMQWNDSYQESVQCFTNNIPQRDGGSHMTALRQVMTRTLNQYI
EQNDHAKKAKVETSGDDMREGLTCVLSVKMPDPKFSSQTKDKLVSSEIGPVVSEVISQAL
ADFLLENPNDAKIICGKIVDAARARDAARRARELTRRKGVLDGLGLPGKLADCQEKDPAK
SEIYLVEGDSAGGSAKQGRDRKFQAILPLKGKILNVERARFDKMISSQEVGTLITALGCG
IGKDDFNIDKLRYHRIIIMTDADVDGSHIRTLLLTFFYRQLPELVERGYIYIAQPPLFKI
KHGKSETYLKDEAELKQYLLRQALNGASLLPSADAEAIAGDALEKLARQYFASEAVIDRH
SRFIDAAVLQAMIGLPALALSTEAEAQQSVDLLTAALEKVASPNSPRYTFSFNRSEESYV
IKVSRRQHGVSTIQHLDEAFLLSGDYAQMRKTADMLNGLLGDGAKVKRGEQIQSVTNFKD
AIEWLLGLIRRNIAIQRYKGLGEMNPEQLWETTMDVTVRRLLKVNVEDALGADAVFTTLM
GDQVEPRRQFIEQNALIARNVDI
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgtctgagcaacaagaatatggcgccgatagcattaaaattctgaaaggtcttgaagcc
gttcggaaacgtccgggcatgtatatcggtgatacacaggacggtagcggcctgcatcat
atggtgttcgaagtgctggataacgctattgatgaatcattagccgggcattgcgatacg
attaaagtgatcattcatgccgataattcgatcagcgtcgaagataacggccgtggtatc
cctactgatattaaagaagacgacgaattcaagcgctctgccgccgaaatcgtcatgacc
gagctacacgccggcggtaagtttgaccagaacagctacaaggtttctggcggcttgcat
ggtgtgggtgtatcggtggtgaatgccttatctgattggctaaagctgacgattcgccgt
aatggcaaagcgcacagcatggagttccgtcagggcgaagcggtttctccgctggctgtg
attggcgacaccgagcgccgtggtaccgaagtgcactttatggcttcgatcgagactttt
ggtctgattgaataccattttgaaattctggctaagcgtattcgcgagctgtctttctta
aataacggcgtaaaaatccagctgatcgaccgcagccatggcaaggaagaaaactttgcc
tatgaaggcggcgtaagcggctttgtgcaatatatgaaccgcaataaatcagtattgcac
ccgcatatcttccatgctgttggcgaaaaagacggcatgattgtagaagtagcgatgcaa
tggaatgattcttaccaggaatcggttcagtgcttcaccaataatattccccaaagggac
ggcggcagccatatgactgcgctgcgccaagtgatgacccgtacgcttaatcaatatatt
gagcaaaacgatcacgctaaaaaagccaaggtagaaacctctggcgacgatatgcgcgaa
ggcctgacctgcgtgttatcagtgaaaatgcctgatccaaaattcagcagccagaccaaa
gacaagctggtttccagcgaaattggcccggtggtcagcgaagtcatcagccaagccctt
gccgatttcctcttagaaaacccaaatgacgccaaaatcatttgcggcaagattgtagat
gcagcgcgagcccgcgatgcagcccgccgtgcccgcgagctaacccgtcgtaaaggtgtg
ttagatggccttggcctgccgggtaagctggccgattgccaggaaaaagacccagcaaaa
tctgaaatttacctcgtcgagggtgattctgcgggtggatctgccaagcaaggccgcgat
cgcaagtttcaagcgattctgcctttgaaaggtaaaatcctgaacgtggaacgcgcacgt
ttcgataaaatgatctctagccaggaagtgggcacgctgattaccgcgctaggctgcggg
attggtaaagacgattttaatatcgacaaactgcgctaccaccgcatcattatcatgacc
gatgcggacgtggacggctcgcacatccgtaccctgctgctgacattcttttaccgccaa
ttgccagaattggttgagcgcggctatatctatatcgcccagccgccactattcaaaatc
aagcacggcaagagcgagacttacctcaaagacgaagcagagctgaagcaatacctgttg
cgccaagccttaaacggcgcatcgcttttaccaagcgcagacgcggaagccattgctggc
gacgcactggaaaaactggcccgccaatacttcgcctctgaagccgttatcgacaggcat
agccgctttatcgatgccgccgtactacaagccatgattggcttgccagcattggccttg
agcacagaagcagaagcacagcaaagcgttgatctgctaaccgccgccttagaaaaagta
gcctcgccaaatagcccgcgttacacctttagctttaatcgctccgaagaaagctatgtg
atcaaggtatcccgtcgtcagcacggcgtatcgaccatccagcatctggacgaagccttc
ctgctatctggcgattacgcacaaatgcgcaaaaccgccgatatgctaaatggcctgctg
ggtgacggtgctaaagtaaaacgcggcgagcaaatccagtctgtaactaactttaaagac
gctatcgaatggctgctcggcctaatccgccgcaatatcgccatccagcgctataaaggt
ctgggcgaaatgaatccagaacagctctgggaaactaccatggacgtgactgtgcgccgc
ctgctcaaagtaaacgtagaagacgcactaggcgcggatgccgtattcaccaccctaatg
ggtgatcaggtagaaccacgtcgtcaatttatcgaacagaacgcgctgattgcgcggaat
gtggatatttga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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