KEGG   Janthinobacterium sp. B9-8: VN23_19565
Entry
VN23_19565        CDS       T04271                                 
Name
(GenBank) RNA pyrophosphohydrolase
  KO
K08311  putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
jab  Janthinobacterium sp. B9-8
Pathway
jab03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:jab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VN23_19565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jab03019]
    VN23_19565
Messenger RNA biogenesis [BR:jab03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     VN23_19565
SSDB
Motif
Pfam: NUDIX NUDIX_4
Other DBs
NCBI-ProteinID: AMC36632
UniProt: A0A109RW51
Position
4345007..4345522
AA seq 171 aa
MLDRDGYRPNVGIIIINRQNQVFWGKRVREHSWQFPQGGIKQGETPEQAMYRELMEEVGL
GPQHVEIIGRTRDWLKYDVPTNWVRREWRGTYRGQKQIWFLLRLTGHDSDVCLRRTTHPE
FDAWRWTEYWSPLDSVIEFKRTVYESALFELTRFFEEAPERVVRAMRFSGH
NT seq 516 nt   +upstreamnt  +downstreamnt
atgctcgatcgtgatggctatcggcctaacgtcggcatcatcatcatcaaccggcaaaac
caggtgttctggggtaaacgagtgcgagagcattcgtggcagtttccgcaaggcggcatt
aaacagggtgaaacacccgaacaggcgatgtatcgcgagctgatggaagaagtcggatta
ggccctcagcatgttgaaatcattggccgcacaagggactggttgaagtacgatgtgccg
acaaactgggttcgccgcgaatggcgcggtacgtaccgagggcagaagcaaatttggttt
ttgcttcgcctgacagggcacgattctgatgtgtgcttgcgccgcactacgcatcctgaa
tttgatgcgtggcgttggactgaatattggtcaccactggattcggtgattgagttcaag
cgtacggtgtatgaatctgccctttttgaactgacgcgtttctttgaagaagcacctgag
cgtgtggttcgtgccatgcgtttttcaggccactag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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