KEGG   Jatropha curcas (Barbados nut): 105628779
Entry
105628779         CDS       T03922                                 
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
jcu  Jatropha curcas (Barbados nut)
Pathway
jcu03013  Nucleocytoplasmic transport
jcu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105628779
   03015 mRNA surveillance pathway
    105628779
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jcu03019]
    105628779
   03041 Spliceosome [BR:jcu03041]
    105628779
Messenger RNA biogenesis [BR:jcu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     105628779
Spliceosome [BR:jcu03041]
 Complex C
  Other components
   EJC/TREX
    105628779
SSDB
Motif
Pfam: Pinin_SDK_memA Atrophin-1
Other DBs
NCBI-GeneID: 105628779
NCBI-ProteinID: XP_020532880
Position
Unknown
AA seq 428 aa
MGSTSAIEKTEEELQREIDELHRQQRQITERLRDPRGLRRGGLAAGGGGPRNFAGNGVRQ
RGFVRPADRDHTDDQPPAKRRLLSAVVKVEDGEIVEDTEVATDLNKKKQSAEEENVGAGI
DNQSADGKLSNLQQIGWSRRDGNQRLGKRETELPVVEPLPRVLPKNEDPSLVSRNKRMLG
QLLGTLEKFRKEDMKLSGTEAFKQRSSALQRAEQRAREESERLRQQEREQIAEKRRRDLT
LRARIAAKTEEKKLELLFRRWSEHHKKLTNFIRTKAEPPIYYLPNKPLDEDATLREQQKE
QIFAEWKTTRREELSEYQKQIAEQYLGNVEKELERWQNARKARRPNNDANLQETMDKELD
THRLEHGPKTRKIPGGNNEDEDDVEDINVAEDDMMDDVLEVDENGRRGDEAAKPEADSTS
PNPENLDQ
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgggtagcacctccgctattgagaaaaccgaggaagagcttcaacgagagatcgatgag
cttcatcgccagcagcgccagattacagagcggcttcgtgatcctcggggactccgacga
ggagggttggctgctggtggtggtggtcctagaaatttcgccggcaatggagttcgtcag
cgaggcttcgttcgaccagctgatagagatcatacagacgatcaaccacctgcaaaacgg
cggcttttgtctgctgttgtcaaggtggaggatggagagattgttgaggatactgaagtg
gcaacggacttgaacaagaaaaagcagtcagctgaggaggaaaatgtcggggctgggata
gataatcagagtgctgatggaaagctgtccaatttacagcagatcggttggtccaggagg
gatggcaatcagagattagggaagagggagactgaacttccagttgttgagcctctgcct
agggtgttgccaaagaatgaggatccaagcttggttagcagaaataaaagaatgttaggg
caacttttaggtactttagagaaattcaggaaagaagatatgaaactttcaggtacagag
gcattcaaacaaaggtcaagtgctttgcaaagagctgagcaacgagcacgagaagaaagt
gaaaggctgaggcagcaagagcgtgaacaaattgcagaaaagagaaggagagatctgaca
ctcagagcacgtattgctgccaaaacagaagaaaagaagttggaattgctgtttcgtcgg
tggagtgagcaccataaaaaacttacaaattttataaggactaaggcagagcctccaatt
tattatttgcctaacaaaccattggatgaagatgcaacattgcgtgagcagcagaaagaa
cagatatttgcggaatggaagaccactaggagagaggaactgtctgaatatcagaagcag
attgcagaacagtatcttggcaatgttgaaaaggaattggaaaggtggcaaaacgcacgg
aaagcaaggagaccaaacaatgatgcgaatttacaagaaacgatggacaaagaattggac
acccataggcttgagcatggtccgaagacaagaaagattcctggtggaaacaatgaagat
gaggatgatgtggaggatatcaatgtcgcggaagatgacatgatggatgatgtgctagag
gttgatgaaaatggcagaaggggcgacgaagcagccaagccagaagctgatagcaccagc
ccgaatcctgagaaccttgatcagtaa

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