KEGG   Jatropha curcas (Barbados nut): 105629113
Entry
105629113         CDS       T03922                                 
Name
(RefSeq) sm-like protein LSM3A
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
jcu  Jatropha curcas (Barbados nut)
Pathway
jcu03018  RNA degradation
jcu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105629113
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105629113
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jcu03019]
    105629113
   03041 Spliceosome [BR:jcu03041]
    105629113
Messenger RNA biogenesis [BR:jcu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105629113
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     105629113
Spliceosome [BR:jcu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    105629113
 Complex C
  U2 snRNP components
    105629113
SSDB
Motif
Pfam: LSM TIG_SUH Glutaredoxin CATRA-C DUF150_C
Other DBs
NCBI-GeneID: 105629113
NCBI-ProteinID: XP_012066020
UniProt: A0A067L3J1
Position
Unknown
AA seq 97 aa
MATEEESAVKEPLDLIRLSLDERIYVKLRSERELRGKLHAYDQHLNMILGDVEEIVTTVE
IDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA
NT seq 294 nt   +upstreamnt  +downstreamnt
atggcgaccgaagaagagagcgcagtgaaagagccattggatctcataagactcagcctc
gatgagcgcatctatgtcaagcttcggtccgaacgagaactgcgcgggaaactccatgct
tatgatcagcatctaaatatgattcttggggatgttgaagaaattgttacaactgttgaa
atcgatgatgaaacatatgaagagattgtacgaactacaaggcgtactgttccttttctc
tttgttagaggagatggtgtcatattggtttctccaccactgaggactgcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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