KEGG   Jatropha curcas (Barbados nut): 105629643
Entry
105629643         CDS       T03922                                 
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X1
  KO
K18995  ATP-dependent RNA helicase DHX29 [EC:5.6.2.6]
Organism
jcu  Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:jcu03012]
    105629643
Enzymes [BR:jcu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     105629643
Translation factors [BR:jcu03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    105629643
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C DEAD HA2_N nSTAND3 AAA_22 DND1_DSRM ATPase FtsK_SpoIIIE T2SSE AAA_19
Other DBs
NCBI-GeneID: 105629643
NCBI-ProteinID: XP_012066649
UniProt: A0A067L1X0
Position
Unknown
AA seq 1460 aa
MAPKKKQQKQSNNKASSTSSKSKPQSSSGPRLQISAENENRLRRLLLNSGQSTQPSSATS
VQDNLSKVQKAKRLKNIYEKLSCEGFSNDQIELALTSIKDNATFESALDWLCLNLPGNEL
PLKFSSGTSLNTNEGSVSVVSTARDNWTPSVNASAKTEEPVQPVSVRIKARWDDNDDALD
SRSQADWIRQYMEQQEEDESQTWEDYDVDGNLVNKDPVPRSYEIIAEEYYAARLEATKAK
EKGDKKTQEQAGHVIRKLKQELASLGLSDDMLAQEFDHERHSVSVPEGTSMSAMPQEQLQ
EKTSSDAEGGSDFLVPSDEIPVEANDVESSSSVEFSEESIPSSVPVQKDIVLEDEAGEVE
LGDFFLEDVASNEALPPQVLELQKKEKRREELLNEKNLEKLDGIWKKGDPHKIPKAVLHQ
LCQKSGWDAPKFNKVLERREGFLYSVSILRKASGRGKSRKAGGLITLQLPDWDETYESAE
DAQNRVAAFALYELFPDIPIHLIVTKPYASLILQWKEGESSSKVENAVEERRAGFVDRLL
NSDVSIARADTTNGLSEPLQNSHVQEASKFSDAGAHPVAGREKITSDVESSYLRQEQENK
KTMQKYRDMLKTRNALPIAGLKDDILQMLNENNFLVVCGETGSGKTTQVPQFILDDMIES
GRGGECSIICTQPRRIAAISVAERVADERCEPSPGSNGSLVGYQVRLDSARNEKTKLLFC
TTGILLRRLVGDRNLAGVTHVIVDEVHERSLLGDFLLIILKSLIEKESGHGTPKLKVILM
SATVDSTLFSSYFGHCPVLTAQGRTHPVTTYFLEDIYESINYHLTSDSPAALKYQTPTFD
KSGSVNNRRGKKNLVLSAWGDDSLLSEDFVNPHYVSSNYQLYGEQTRQNLKKLNEDVIDY
DVLEDLICYVDETCGEGAILVFLPGVSEIHMLLDRLSASYRFGGTSSDWVLPLHSSIAPM
DQKKVFLRPPENTRKVIIATNIAETSITIDDVIYVIDCGKHKENRYNPQKKLTSMVEDWI
SQANARQRRGRAGRVKPGICFCLYTRHRFEKLMRPYQVPEMLRMPLVELCLQIKLLSLGH
IKPFLSKALEPPNDEAMTSAISLLYEVGAVEGDEELTPLGHHLAKLPVDVLIGKMMLYGA
IFGCLSPILSISAFLSYKSPFVYPKDERQNVERAKLALLTDKSDGSNDSNDNDKQSDHIV
MMVAYKKWEKILQERGAKAAQQFCNSYFLSSSVMYMIRDMRIQFGSLLADIGFITLPKNY
QTLGKNRENLHRWLSDRSQTFNIYSHHSSIVKAILSAGLYPNVAATEQGITATAFNSLKQ
SSNPVTKARPLWYDGRREVHIHPSSINSGVKAFQHPFLVFLEKVETNKVFLRDTTIVSPF
SILLFGGFINIQHQTGLVTIDGWLKLTAPAQSAVLFKELRLALHSLLKELVQKPKNATIV
ENEVIRSMIQLLLDEDKPSK
NT seq 4383 nt   +upstreamnt  +downstreamnt
atggcaccaaaaaagaaacagcagaagcaaagcaacaacaaagcatcttcaacgtcttct
aaatccaaaccacaatcttcctccggtccaaggcttcagatttctgccgaaaacgagaat
cgtctaagacggctcttacttaactccggccagtccactcagccatcctccgcgacttct
gttcaagataatctctctaaggttcaaaaggccaagagattgaaaaatatctacgagaag
ctctcctgtgaaggcttttctaatgatcaaattgagcttgctctcacttcaatcaaggat
aatgctacatttgaatctgctttggattggttatgcttgaatttaccgggaaacgagctt
cctttgaagttttcaagtggaacttcgctaaatacaaatgaaggttctgttagtgttgta
tcaactgcgcgggacaattggactccttcagtcaatgcttccgcaaagaccgaggagcct
gtgcaaccagtttctgttagaatcaaagcacggtgggatgataatgatgatgctctagat
tctcgttcacaggcagattggattaggcaatatatggaacaacaggaagaggatgagtcc
caaacttgggaagactatgatgttgatggaaatttagtgaacaaggatcctgtaccgcgg
tcttatgaaattatagctgaagagtactatgcagcacgattggaagctacaaaagccaaa
gaaaaaggggacaaaaaaactcaggagcaagcaggccatgttatccgcaagctcaaacag
gaattggcttctttagggttatcagatgacatgttagcacaagagtttgatcatgaacgt
cattctgtttctgtgcctgagggcacatctatgagtgctatgcctcaagagcaacttcag
gaaaaaacatcatctgatgcagaagggggctcagactttcttgtgccatcggatgaaata
ccagtagaagcaaatgatgtggaaagttcaagttctgtggagttttcagaagaatctatt
ccctctagtgtacctgtacaaaaagacattgtattagaagatgaggctggagaagtggag
ctcggtgatttctttttggaagatgttgcatcaaatgaagctttacctcctcaagtattg
gaattacaaaagaaggaaaaaaggagagaagaattattaaatgagaagaatttggagaaa
ttagacggcatttggaagaagggggacccgcataagattcctaaggctgtccttcaccaa
ctatgtcaaaaatcagggtgggatgctccaaaatttaataaggtgctagaaaggagagaa
ggcttcctgtattctgttagcatattacgcaaagctagtggaaggggcaagagtagaaaa
gctggcggtttgatcacccttcagcttcctgactgggatgaaacatatgaatctgctgag
gatgcccagaacagagttgctgcatttgctctttacgaactgtttcctgatatccctatt
cacctgatcgttaccaaaccttatgcttctcttattttacagtggaaagaaggggaatca
tcaagcaaagtggaaaatgctgtggaggagcggagagctggttttgtggatcggttattg
aattcagatgtatcgattgccagagctgatactacaaatgggctttcagaaccattacaa
aactctcatgttcaagaggctagcaagtttagtgatgctggtgctcatcccgtagcagga
agggaaaagattacaagtgacgtggaaagttcttatctgagacaggagcaagaaaacaaa
aagacaatgcagaaatacagggatatgttgaaaactagaaatgctcttcctattgctgga
ttgaaggatgatatactgcaaatgctgaatgaaaataattttcttgttgtttgcggggaa
acaggctctggaaagactactcaggttccacaatttatattggatgacatgattgaatct
ggacgtggtggagagtgtagcattatatgcacacaaccgaggagaatagcggctatttct
gtggctgaaagagttgctgatgagcgatgtgaaccttcacctggttcaaatggctcctta
gttggttatcaagttcgtcttgatagtgcaaggaatgagaaaacgaagcttctcttttgc
acaacaggcattcttttgaggaggcttgtgggggatagaaacttagccggtgttactcat
gtcattgttgatgaggtgcatgaacggtcactattgggtgattttctactcattattttg
aagagcctgatagagaaggaatctggtcatggcacgccaaagctgaaagttattcttatg
tctgcaactgttgattcaactttattttcaagttattttggacactgtcctgttcttact
gcacaaggccgtacgcatcctgtgacaacttactttcttgaggatatatatgagagtatt
aattatcatttgacttcagattctccagctgctttaaaataccaaacaccaacatttgat
aagagtggttctgtgaataaccgtagagggaagaaaaatcttgtcttgtctgcttggggt
gacgattctctgctttcagaagactttgttaatccccattatgtctcaagcaattatcaa
ttgtatggtgagcaaacccgacagaatttgaaaaaattgaatgaagatgtgattgactat
gatgtgttggaagacttgatatgctatgttgatgaaacatgtggtgaaggtgccatactt
gtctttttgcctggagtgtctgaaattcacatgctactcgataggttatctgcatcttac
cgatttggtggaacatcatctgactgggtacttcctttgcattcttctatagcaccaatg
gatcaaaaaaaggtgttcttgcgtccacctgaaaacacacgcaaggttattattgcaaca
aacattgcagagactagtataacaatagatgatgtaatttatgtgattgactgtggaaag
cacaaggaaaatcgttataatcctcaaaaaaaattgacaagcatggttgaggattggata
tctcaagcaaatgcgaggcaacgccgaggaagagctggacgtgttaaacctggaatttgc
ttttgcttgtatacacgtcatagatttgagaaacttatgcgtccttatcaggttcctgag
atgcttcggatgccattagtggagttgtgtttgcaaataaagttactttctcttggtcac
ataaaaccatttttatccaaggctttggaacctccaaacgatgaggctatgacttctgca
atttcattgctatatgaggttggagctgtagaaggggatgaagagttgacacctcttggg
catcatttggcaaaacttcctgttgatgtattgatcggaaagatgatgctgtatggtgca
atatttggttgcttatcacctattctttccatttctgcatttctcagctataaatcacct
tttgtatacccgaaagacgagaggcaaaatgttgaaagggcaaagcttgcgcttttaacc
gataagtcagatggctcaaatgattcaaatgacaatgataagcaatctgatcacatagta
atgatggttgcgtacaagaagtgggagaagattctgcaggagaggggtgctaaagctgca
cagcaattttgcaattcttattttttgagcagttcagttatgtacatgataagagacatg
aggatacaatttgggtcactgctggcagacattggattcatcactcttccaaagaattac
cagactctaggaaaaaacagagagaatcttcacagatggttatctgacagatcacagaca
ttcaatatatattcacatcactcctcaattgtgaaggcaattctaagtgcaggtttgtat
ccaaatgtggctgccactgaacaaggcattactgcaacagcttttaacagccttaagcag
tctagcaatcctgtaacgaaggctcgtcctctctggtatgatggaagaagagaggttcat
atacacccatcttcaatcaacagtggtgtaaaagcatttcagcacccatttctagtcttc
cttgagaaggttgaaaccaacaaagtatttctgcgggatactactattgtatctcccttc
tctatcttgctgtttggtggcttcattaacattcagcatcagacaggattggtcaccata
gatggatggttaaagctaacagctccagcccaatctgctgtcttatttaaggaacttaga
ttagctcttcattccctactaaaggaacttgtccaaaagccaaagaatgcaactattgtt
gagaatgaggtcatcagatctatgatccagttattgttagatgaagacaaaccctcgaaa
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (12)   
   Pfam (12)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system