KEGG   Jatropha curcas (Barbados nut): 105629658
Entry
105629658         CDS       T03922                                 
Name
(RefSeq) tRNA pseudouridine synthase A isoform X2
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
jcu  Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:jcu03016]
    105629658
Enzymes [BR:jcu01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     105629658
Transfer RNA biogenesis [BR:jcu03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    105629658
 Prokaryotic type
    105629658
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-GeneID: 105629658
NCBI-ProteinID: XP_012066662
Position
Unknown
AA seq 342 aa
MTENVKHCLDTSVASLDRPSKIPKTQDLTVDDEDGEELQESGVIAQLMSPNPRLQRYLIA
VEYIGTRFAGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRTDAGVHALSNVCHVDVE
RISKRKPGEVLQPHEPSVVRRAVNHFLQKNEGDITVVDVRCVPADFHARYKACERTYFYR
LLSGPEPLSTFEKDRAWHVPEELDLVAMQEACKVLVGHHDFSSFRASGCQAKSPIRTLDE
LSVLEVASTLYFPSTMAGGSYGEIELGFGMRRKHHCYVVTARARSFLYHQVRLLVGVLKS
VGTGNRTSSDVERILNAKSVTEASPMAPACGLYLGHVKYDLP
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgactgaaaacgtaaaacactgtttagatacttctgttgcatctcttgacagaccttcc
aagattccaaaaacccaagacctcaccgtcgacgacgaagacggagaagaattgcaggaa
tcgggtgttattgctcaattaatgagtccaaatcctagacttcaacgctatttgattgct
gttgagtatattggtacccgattcgccggttcccagaagcagctgaattgcagaaccgtg
gttggggtccttgaggaggcttttcataaatttatcggccagccagtatcaatctccttg
tctagtcgaactgatgcaggagtacatgccttgtcgaatgtttgtcatgttgatgttgaa
cgcataagcaaaaggaagccgggtgaagtgttacagccacatgaaccatcagtagttaga
agagctgtgaaccatttcttgcagaagaatgaaggtgatattacagtggttgatgttcga
tgtgttccagctgatttccatgcgagatataaagcttgcgagcgcacgtatttctaccga
cttctctctggaccggagcctttgtctaccttcgagaaagacagggcgtggcatgtgcct
gaggagctggatcttgttgctatgcaggaagcatgcaaagttcttgttggacatcatgat
ttcagttcattcagggcatctggttgccaggcaaaatcaccaatcagaactttggatgaa
ctttctgttcttgaggtggcttcaacactgtattttccatctacaatggcaggaggctcc
tatggtgagattgaattagggtttgggatgaggagaaaacaccattgctatgttgtaaca
gcacgtgcccgctcctttctttatcaccaggttcgactgctcgttggtgttctcaaatct
gttggcactggaaatcgaacaagttcagatgtggaacgaatactgaacgctaagtctgtg
actgaagcaagtcccatggccccagcttgtggtctctaccttggacatgtaaagtatgat
ctaccgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system