KEGG   Jatropha curcas (Barbados nut): 105636827
Entry
105636827         CDS       T03922                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic isoform X1
  KO
K17600  vacuolar protein sorting-associated protein 54
Organism
jcu  Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:jcu01009]
    105636827
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:jcu04131]
    105636827
Protein phosphatases and associated proteins [BR:jcu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     105636827
Membrane trafficking [BR:jcu04131]
 Endosome - Golgi transport
  Tethering complex
   GARP complex
    105636827
SSDB
Motif
Pfam: Vps54 Vps54_N
Other DBs
NCBI-GeneID: 105636827
NCBI-ProteinID: XP_012075577
UniProt: A0A067KFA0
Position
Unknown
AA seq 1042 aa
MDSQPSQSGRSPLDSPTSTSTATSAVTTSISSYRTNSSLAKSILDASSQSLSSILNNPHV
GKSGVYGSDASSWVGWWSSSTSVSPPEFTPLISNKATPELNRSDFQNYLSSIAEAYNRFE
DIRNHSSKEENLDFESNGGQGEALVACLREVPALYFKEDFALEDGPTFRAACPFSNVTEN
VVLQEKLSQYLDVVELHLVKEISLRSNSFFEAQGQLQDLNVKIVEGCNRIRELKETIRLL
DKDLVESARNIQDLNVTRSNMLALQRKLRVILYVNQALSALKLLVASADCAGALDVTDDL
QHLLDGDELTGLHCFLHLRDHVAASIDSVNSILSAEFMRAAIHDAGGRDVVILLKSKARA
SISTNGKDEVKLDEEETSNFHERLLPLIIGLLRTAKLPNVLRIYRDTLTADMKTAIKTAV
AELLPILVSRPLESDFTPGERTVDADGGGLSLASKLRSLSSESFVQLLDAIFKIVQAHLV
RAAEVKKAIEWIMSNLDGHYAADSVAAAIAVGAAAAETAPEIDVQAGSVSPFLPQKSTAK
VSPSLGKANDTSSPSNMSRNFRADVLRENAEAVFAACDAAHGRWAKLLGVRALLHPKLRL
QEFLSIYSITQEFITATEKIGGRLGYSIRGTLQSQAKAFVDCQHEMRMTKIKAVLDQETW
VEVDVPEEFQAIVTALFSSEALITEDLDTAQGKMTTSFGEVVPSNDGSGVADAEVQNAQQ
QLVRMDSSEMSLQNTVQAKSSPLAETTEVKKANVAISSIQSNNTNTKDRGKPASQTLTFG
GVSYHMVNCGLILLKMLSEYIDMNNFLPALSSEVVHRVVELLKFFNTRTCQLVLGAGAMQ
VSGLKSITSKHLALASQVISFIYAIIPEIRRILFLKVPETRQALLLSEIDRVAQDYKVHR
DEIHTKLVQIMRERLLFHLRGLPQIVESWNRPDDADSQPSNFARSLTKEVGYLQRVLSRT
LHEADVQAIFRQVVVIFHSQISEAFSRFEISTPQAKKRLHLEVKHILGCIRSLPTDNLTK
SGTPNWGRLDEFLEQKFGTEAG
NT seq 3129 nt   +upstreamnt  +downstreamnt
atggattcacagccttcccaatcgggaaggtcaccacttgactctccgacctccacttcc
accgccacctccgccgtaacaacttcgatttctagttatcggacaaattcttcgttagct
aaatcaatcttagatgcaagcagccaaagtctttcctcaattctcaacaatcctcatgtt
ggcaaatccggcgtttacggttccgatgcatcatcttgggtaggctggtggtcttcctca
acttcagtttctccaccggagttcactcctttgatctctaacaaggccacgccagaattg
aatagatccgattttcagaactacttgtcgtctattgctgaggcatataacagattcgaa
gatattagaaatcatagttccaaagaagagaatctggactttgaaagcaatggcggtcaa
ggagaagcgcttgtggcttgtttaagagaagtaccagcactatatttcaaagaagatttt
gctttagaagatgggcctactttccgtgcagcttgtccattctctaatgtgacggaaaat
gtggttttgcaagagaagctgtctcagtatttggatgtggtggaattacacttggtgaag
gagatttcattgcgttccaattcgttttttgaggctcaaggacagttgcaggatcttaat
gtgaagattgtggaggggtgtaataggattcgggagttgaaagaaactattaggcttttg
gataaggatttggttgaatctgctagaaatattcaggatttaaatgttactaggagcaat
atgttggctttgcagcgcaagttgagggttattctgtatgttaaccaagctctttctgct
ctcaaattgcttgttgcatctgcagattgtgctggagctttggatgttactgatgatttg
caacatctgttggatggagatgagctgactggtctacattgctttcttcaccttcgggat
catgtagctgcttcaatagattctgtgaacagcatcctctcagcagaatttatgcgtgct
gcaattcatgatgctggtggtagagatgtggttatcttattgaaatctaaagccagggct
tccatttctactaatggaaaagatgaagttaaactggatgaagaagaaacctctaatttc
catgagcgtctcctccctctcatcattgggttgcttagaacagctaagctgcctaatgtt
ttgaggatatatcgtgatacgcttactgcggacatgaaaactgctattaaaactgcagta
gcagagttgcttcccattcttgtgtctcggcctttggagtcagatttcacacctggagag
cgaacggttgatgcagatggtggaggtttatctcttgcaagcaagttaaggagtttgtca
tctgaaagctttgtgcaactgttagatgctattttcaagattgtacaggcacatttggtg
cgggctgctgaagtgaaaaaggcaattgagtggattatgagcaacttggatggacactac
gctgctgattcagttgctgctgcaattgcagttggtgctgcagctgctgaaacagctcca
gaaattgacgttcaggccggttcagtttccccatttttgcctcaaaaaagtacggccaag
gtttctccatctctagggaaagcaaatgacacatcaagcccctcaaatatgtccagaaat
ttcagggctgatgtattacgagagaatgcagaagctgtgtttgcagcttgtgatgcagct
cacggaagatgggcaaagcttcttggggtccgtgctctgcttcatcctaagttgagattg
caggagtttttgagcatatacagcattactcaggagtttattactgctactgagaagata
ggtggaagattgggctacagcattcgtggaacgttgcagtcacaggccaaagcatttgtt
gattgccagcatgagatgcgaatgacaaaaattaaggcagtgcttgatcaagagacatgg
gtggaagttgatgttccagaagaatttcaggccatagttacagccttgttttcttctgag
gcattgataacagaggacctagatactgctcaaggtaagatgacaacaagcttcggtgaa
gtggtcccaagcaatgatggttcaggtgttgctgatgctgaagttcaaaatgctcaacag
caacttgtgaggatggactctagtgaaatgtctttgcaaaatactgtgcaagcgaaatct
tctcctttagctgaaacaacagaggtcaagaaagccaatgttgcaatctcttcaatacag
agcaacaatactaatacaaaggatcgtggaaaacctgcatcgcaaacgcttacttttgga
ggtgttagttatcacatggtaaactgtggcttaatattgctgaagatgttgtcagagtac
attgatatgaataattttttgccagcactgtcttcagaagttgtccatcgtgttgtcgag
ctattaaaattcttcaatacgaggacttgtcaacttgttcttggggctggtgctatgcag
gtgtctggactgaagtctattacttctaaacacttggcgcttgcaagtcaagtcatcagt
tttatatatgcaattattcctgaaatcaggcgtattcttttccttaaagtacctgagacg
agacaggcattactgctttctgagattgatcgtgtagcacaggattacaaggttcaccga
gatgaaatacatacaaagcttgttcagataatgagagaaaggttgttgtttcatttacgt
ggattgcctcaaattgttgagagctggaacagacctgatgatgctgactcacagcctagt
aattttgctcgatctctaacaaaggaagttggatacctacaacgtgtcttatctcgaact
ttgcatgaggcagacgttcaagcaatttttaggcaagtggttgtaattttccattcacaa
atttcagaagcattttcacggtttgagatcagcactccacaagcaaagaaaaggctgcat
ctggaggtcaagcacattcttggatgcattaggtcattgcctactgataatttgactaaa
tccggtacccctaattggggacgacttgacgaattcttggaacaaaagtttggaactgaa
gctggttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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