KEGG   Jatropha curcas (Barbados nut): 105644122
Entry
105644122         CDS       T03922                                 
Name
(RefSeq) probable ubiquitin conjugation factor E4 isoform X3
  KO
K10597  ubiquitin conjugation factor E4 B [EC:2.3.2.27]
Organism
jcu  Jatropha curcas (Barbados nut)
Pathway
jcu04120  Ubiquitin mediated proteolysis
jcu04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    105644122
   04120 Ubiquitin mediated proteolysis
    105644122
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:jcu04121]
    105644122
Enzymes [BR:jcu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     105644122
Ubiquitin system [BR:jcu04121]
 Ubiquitin ligases (E3)
  U-box type E3
   105644122
SSDB
Motif
Pfam: Ufd2P_core U-box YgaB
Other DBs
NCBI-GeneID: 105644122
NCBI-ProteinID: XP_012084776
UniProt: A0A067JTK1
Position
Unknown
AA seq 1026 aa
MATSNKPQRSLEEIEDIILRKILLISLTDSMVTDSRIVYLEMTAAEILSEGKDLKLNRDL
VERVLIDRLSGQFPGGEPPFQYLLGCYCRATEEEKKIANMKDKNVKLELDVSIKQAKKLF
VSYCRIHLGNPDMFPFNSDPRKSNVSPLLPLIFAAVDEFNSGGTQPPPRRFWDDLFLDGD
YDSLDPIFKGLFEDLRGNVIKVSALGNFQQPLRALAFLLRFPAGVKALVSHPWWIPKGAY
LNGRVIEMTSILGPFFHVSALPDHTIFKSEPDVGQQCFSEASTRRQSDLLSSFTTIKTLM
NNLYDDLEQVILTLLKNSDAREIVLQYLAEVINRNSSRAHIQVDPISCASSGMFVNLSAV
MLRLCEPFLDASLTKRDKIDAKYVFYSNRLELRGLTALHASSEEVSEWIDKEHGQIDVSM
QSGNSENRLLQSQEATSSGSTADKPTSSSGKKVKYTFICECFFMTARVLNLGLLKAFSDF
KHLVQDISRCEDTLSTLRAMQEQAPAQQLESDIARLEKDLELYSQEKLCYEAQILRDEAF
IQRALSFYRLLVVWLVGLVGGFKMPLPPTCPMEFASLPEHFVEDAMELLIFASRIPRALD
GVLLDDFMNFIIMFMASPTYIRNPYLRAKMVEVLNCWMPRRSGSSATATLFEGHQLSLEY
LVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVY
LNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPAQERQERTRLFHSQENII
RIDMKLANEDVSMLAFTSEQITAPFLLPEMVDRVASMLNYFLLQLVGPQRKSLSLKDPEK
YEFRPKQLLKQIVDIYVHLAKGDTENIFPSAISKDGRSYNEQLFNAAADVLRRIGEDGRV
THEFIELGKRAKVAASEAMDTEAALGEIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQ
RHLLSDATDPFNRSHLTADMLIPNIELKARIDEFIRSQELKRHGDDFSMQSSKATIQRTT
GEMLID
NT seq 3081 nt   +upstreamnt  +downstreamnt
atggcgacttctaataagccccagaggtctctcgaagaaatcgaagacataattcttcgc
aaaatcctgctaatttccctaactgattctatggtaactgattctcgaatcgtctacttg
gagatgactgcagctgagatccttagcgaaggcaaagacttgaagctcaatcgcgacctg
gtggaacgcgtgttgattgatcggttatccggtcaatttcccggtggcgagcctcctttt
cagtatctccttggctgctactgccgtgcgacggaagaggagaagaaaatcgctaatatg
aaggacaaaaatgtcaaattggagctggatgtttcaatcaaacaggcgaagaagttattc
gtttcgtattgtagaattcatttagggaatccagatatgtttccttttaattctgatcct
agaaagtctaatgtttcaccgcttttgcctctcatttttgcggcggtggatgaatttaat
agcggtggaacccagccgccgcctcggaggttttgggatgatttgtttctggatggagat
tatgatagcttggacccaatattcaaagggctttttgaggatttgagagggaatgtcata
aaggtgtcggctttagggaattttcaacagccattaagggctttggcttttttgcttcgt
tttcctgcgggagttaaggctcttgtcagtcatccatggtggattcctaaaggggcttac
ttgaatggaagagttattgaaatgactagtattttgggacccttttttcatgttagtgct
ttgcctgatcacactattttcaagagtgaaccagacgttgggcagcagtgcttctctgaa
gcatcaactcgtcgccaatctgatttgttatcttcattcaccacaatcaagactcttatg
aataacttatatgacgatctagaacaagttattcttactctccttaaaaacagtgacgcc
cgtgaaattgttcttcagtatcttgctgaggtgatcaatagaaactcatcaagagctcat
atccaggttgatcctatatcttgtgcaagttctggcatgtttgttaatctaagtgctgtc
atgcttcgactctgcgaaccttttttagatgcaagtttgacgaaaagggataaaattgat
gcaaaatatgtgttctacagtaaccgtttggaactaagggggttgacagccttacatgca
tcatcagaagaagtttctgagtggattgataaagagcatggacaaatagatgtctctatg
caatcgggcaatagtgaaaatcgcttgcttcaatctcaagaagccaccagttctggtagc
actgctgacaagcctacatcaagtagtggtaaaaaggtcaaatacacatttatttgtgaa
tgcttctttatgactgcaagagtgctcaacttaggtctgttaaaagcattttcagacttc
aagcatctggtccaggacatttcaagatgtgaagataccctctccacgctaagggccatg
caagagcaggcacctgctcaacaactggagtcggatatcgctcgccttgagaaagattta
gagttgtattcacaggaaaaactttgctacgaagctcagattttaagggatgaagcattt
attcagcgtgccctttctttctaccgtttactggtggtttggttggtgggtctggttggt
ggatttaaaatgcccttgccaccaacatgccctatggaatttgcatccttgcctgaacat
tttgtggaagatgccatggaattgcttatatttgcttcccggattccgagagctttggat
ggagtcttgttggatgattttatgaatttcattatcatgttcatggccagtccaacatat
attaggaacccttatttaagagcaaagatggttgaagtattgaactgctggatgcctcgt
agaagtggttcatcagctacagctacattgtttgaagggcaccaattgtcccttgagtat
cttgtgaggaacctcttgaagctttatgttgacattgagttcacaggttctcatacccag
ttttatgacaagttcaacatccgacataacattgctgaacttctcgaatacctatggcag
gtcccaagtcatcgaaatgcttggagacagattgcaaaggaagaggaaaagggtgtctat
ctgaatttcttaaacttcctgatcaatgatagcatctatcttcttgatgaaagtctgaac
aaaattcttgaacttaaagagttggaagctgagatgtcgaacacagcagaatgggagaga
agaccagctcaagagaggcaggagagaacccgtcttttccactcccaagagaatatcatt
cggattgatatgaaactggcaaatgaagatgtgagcatgctagcttttacatcagagcaa
attacagcacctttcttacttcctgagatggttgacagagtagccagcatgctcaattac
tttttgttacaacttgtgggtccccaaagaaaatctctaagtcttaaagatcctgagaag
tatgaatttcgtccaaagcagttgcttaagcagattgtcgacatatatgttcatctagcg
aagggtgatacagaaaacattttcccatctgccatctcaaaggatggccggtcatacaat
gagcagttatttaatgctgcagctgatgtcttaagaaggattggggaagatgggagggtt
acacatgaattcattgagctcggtaaaagagccaaagttgcagcgtcagaggcaatggac
actgaagctgcgcttggagagataccagatgaattccttgaccccattcaatacactcta
atgaaggatccggtcatcttaccttcttcaagaataacagttgacaggcctgtaattcaa
aggcatcttctcagtgatgcgactgatccattcaatcgatcccatctcactgcggacatg
ttgattccaaatatcgagttaaaggcaagaattgacgagttcattaggtcccaagaatta
aaaaggcacggggatgacttcagtatgcaaagctctaaagcaacaattcaaagaacaact
ggggaaatgttaattgattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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