KEGG   Jatropha curcas (Barbados nut): 105645505
Entry
105645505         CDS       T03922                                 
Name
(RefSeq) general transcription factor IIF subunit 2
  KO
K03139  transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
jcu  Jatropha curcas (Barbados nut)
Pathway
jcu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    105645505
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:jcu03021]
    105645505
Transcription machinery [BR:jcu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIF
     105645505
SSDB
Motif
Pfam: TFIIF_beta TFIIF_beta_N DUF1672
Other DBs
NCBI-GeneID: 105645505
NCBI-ProteinID: XP_012086509
UniProt: A0A067JPF6
Position
Unknown
AA seq 275 aa
MDDSGNTTNASTNRNSNKIGGSGGVVIGGPVETARAEKAVWLMKCPALVSRSLKNPTLDD
PSRPVAKVVLSIDPLNSGDDNSSRQFTMELADNESGNAPKSYSMDMSEDFIPMSVFSESS
QGKVSVEGKILFKFDMRPHSENLENYAKICRERTKKYMTKGRQIQVIDNDTGSHMRPMPL
FIASTPNEKKKPPAKATDTKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLK
DILKELCVYNNKGTNQGSYELKPEYKRTAEEPGAK
NT seq 828 nt   +upstreamnt  +downstreamnt
atggacgactctggcaatacaaccaacgctagtaccaaccggaatagtaataagatcggc
gggagcggtggtgttgtcattggtggaccggtggagacagccagagcagagaaagcggtg
tggttaatgaaatgccctgctttggtctctcgctctttgaagaacccaactcttgatgat
ccttctcgcccagttgctaaagtagtcctctccatcgaccctcttaattccggagatgat
aactcctctcgtcagttcaccatggaattggctgacaatgaatctggaaatgcacccaag
tcttactccatggatatgtctgaagattttatcccgatgtctgtgttttctgagtcatct
caaggaaaggtttctgtggagggaaaaatattatttaaatttgacatgaggccccattct
gaaaaccttgagaactatgcaaaaatttgtcgtgaaaggactaagaagtatatgaccaag
ggcagacaaatacaggtcatcgacaatgacactgggagtcatatgaggcccatgccatta
tttattgcctctacacccaatgagaagaagaaaccacctgccaaagcaacagatacgaaa
agaacaaggagagaccgtggagagatggaagatatcatgtttaagctctttgaaaggcaa
tcaaattggacattaagacaactcatccaagagactgaccaacctgaacaatttctgaag
gatatccttaaagaactttgtgtctacaacaataagggtactaatcaaggatcatacgaa
ctgaagccagaatacaagagaacagccgaggaaccaggtgctaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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