KEGG   Jatropha curcas (Barbados nut): 7564766
Entry
7564766           CDS       T03922                                 
Symbol
rpoA, JacuC_p052
Name
(RefSeq) RNA polymerase alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
jcu  Jatropha curcas (Barbados nut)
Pathway
jcu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    7564766 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:jcu03021]
    7564766 (rpoA)
   03400 DNA repair and recombination proteins [BR:jcu03400]
    7564766 (rpoA)
Enzymes [BR:jcu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     7564766 (rpoA)
Transcription machinery [BR:jcu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     7564766 (rpoA)
DNA repair and recombination proteins [BR:jcu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      7564766 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2
Other DBs
NCBI-GeneID: 7564766
NCBI-ProteinID: YP_002720144
UniProt: C0LEA6
Position
CP
AA seq 339 aa
MVREKVTISTRTLQWKCVESRTDNKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
CITRAKSEKIPHEFSTIAGIQESIHEILMNLKNVVLKSNLYGTCDASIYVKGPGYVTAQD
IILPPFVEIIDNTQHIASLTESIDLCIGLQIERNRGYRIKPTNNFQDGSYPIDAVFMPVR
NANHSVHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEENLHLE
INQHKVTLPLFTFHGRLTKLRKNQKEIALKYIFIDQSELTPKTYNCLKRSNIHTLSDLLN
KSQEDLMKIENFRIDDVKHILGILEIEKHFAIDLPKNKI
NT seq 1020 nt   +upstreamnt  +downstreamnt
atggttcgagagaaagtaacaatatctactcggacactgcagtggaaatgtgttgaatca
agaacggacaataaacgtctttattatggacgctttattctatctccacttatgaaaggc
caagctgacacaataggcattgcgatgcgaagagctttgcttggagaaatagaaggaaca
tgtatcacacgtgcaaaatctgagaaaataccacacgaattttctactatagcaggtatt
caagaatcaatacatgaaattttaatgaatttgaaaaatgttgtattgaaaagcaatttg
tatggaacttgtgacgcgtctatttatgtcaaaggtcctggatatgtaactgcccaagac
atcatcttaccgccttttgtggaaattattgataatacacagcatatcgctagcctaacg
gaatcaattgatttgtgtattggattacaaatcgagaggaatcgcggctatcgtataaaa
ccgacaaataactttcaggacggaagttatcctatagatgctgtattcatgcctgttcga
aatgcgaatcatagtgttcattcttatggaaatggaaatgaaaagcaagagatacttttt
ctcgaaatatggacaaacggaagtttaactcctaaagaagcacttcatgaagcctcccga
aatttgattgatttatttattccttttctacatgcagaagaagaaaacttacatttagaa
ataaatcaacacaaggttactttacccctttttacttttcatggtagattgactaaatta
agaaaaaatcaaaaagaaatagcattgaaatacatttttattgaccaatcagaattgacc
cctaagacctataattgcctcaaaaggtccaatatacatacattatcggaccttttaaat
aagagtcaagaagatcttatgaaaattgaaaattttcgcatagacgatgtaaaacatata
ttgggtattctagaaatagaaaaacatttcgcaattgatttaccaaagaataaaatataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system