KEGG T00972: Jden

Jonesia denitrificans: Jden_0615

Entry

Jden_0615         CDS       T00972

Name

(GenBank) tRNA pseudouridine synthase A

K06173

tRNA pseudouridine38-40 synthase [EC:5.4.99.12]

Organism

jde Jonesia denitrificans

Brite

KEGG Orthology (KO) [BR:jde00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:jde03016]
    Jden_0615
Enzymes [BR:jde01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     Jden_0615
Transfer RNA biogenesis [BR:jde03016]
Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Jden_0615
Prokaryotic type
    Jden_0615

SSDB

Motif

Pfam:

PseudoU_synth_1

Other DBs

NCBI-ProteinID:

ACV08279

UniProt:

C7R164

Position

655043..655975

AA seq 310 aa
MLVWGTDREVGAPHLFVRDCVVGVIRIRCDVAYRGTDFVGWARQPGLRSVQGTLEDALER
LMGERIAVTVAGRTDAGVHARGQVVHCDVPGDRWERLPGRSDRTPGEALRAKLGGILPSD
VVVRRVAPAPPGFDARFSALSRTYYYRIADDVMMRDPLTAPFVLWVRSPLDVEAMNRGAA
PLVGLRDFAAFCKPRPGASTIRELQDFRWERVEQGPDEGLVRATVRADAFCHNMVRALVG
ASLDVGRGVRGEEWLVQALTSKSRVNSSAVVQPHGLTLEQVAYPPVDQLADRAQAIRARR
MDEELLDGGV

NT seq 933 nt +upstreamnt +downstreamnt
gtgcttgtgtggggcaccgaccgtgaggttggtgccccacacctgtttgtgagggattgt
gtggttggcgtgattcggattcgttgtgatgtggcttatcgtggcacggactttgtgggg
tgggcacgtcagccgggtttgcgcagtgttcagggcacccttgaggacgcgttggagcgt
ttgatgggggagcgcattgcggtgactgttgctgggcgtacggatgctggtgtccatgcg
cgtgggcaggttgttcattgtgatgttcctggtgaccggtgggagcggttaccgggccgg
tcggatcgtacgccgggtgaggctctgcgagctaagttgggtgggattttgccttccgat
gtggtggttcgtcgggttgccccggcaccgcctggttttgatgcgcgtttttcggcgttg
tcgcggacctactattaccgtattgctgacgatgtgatgatgcgtgatccgttgacggcg
ccttttgtgttgtgggtacgctcacctcttgatgttgaggcgatgaatcgtggtgcagcg
ccgttggtggggttgcgggattttgcggcgttttgtaagccgcgtccaggcgcatcgact
atccgtgaactgcaggatttccgctgggagcgggtggagcaggggccagatgaagggctt
gtgcgtgccactgtgcgcgcggatgcgttttgtcacaatatggtgcgcgcgttggtgggt
gcgtctcttgatgtggggcggggggtgcgtggtgaagagtggttggtccaggcgttaacg
tcgaagtcgagggtgaattcatcggcggtggtgcagccacatgggttgactctcgagcag
gtagcgtatccgccggtcgaccaactagctgaccgggcgcaggcgatccgtgcccgccgg
atggatgaggaactgttggacggcggtgtgtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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