KEGG   Jeotgalibacillus malaysiensis: JMA_00080
Entry
JMA_00080         CDS       T03570                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
jeo  Jeotgalibacillus malaysiensis
Brite
KEGG Orthology (KO) [BR:jeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:jeo03032]
    JMA_00080
   03400 DNA repair and recombination proteins [BR:jeo03400]
    JMA_00080
Enzymes [BR:jeo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     JMA_00080
DNA replication proteins [BR:jeo03032]
 Prokaryotic type
  DNA Topoisomerases
   JMA_00080
DNA repair and recombination proteins [BR:jeo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      JMA_00080
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: AJD89325
UniProt: A0A0B5AG69
Position
5117..7054
AA seq 645 aa
MATEDTNIQAYDENQIQVLEGLEAVRKRPGMYIGSTAARGLHHLVWEIVDNSIDEALAGH
CDTISIRITEDNWIEVEDNGRGIPVGTHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGGL
HGVGASVVNALSEELQVYVHRDGNVYHQTYKQGVPQFDLKVIGETDHTGTITRFKADPEI
FTETTEYDFDTLANRVRELAFLNRGLALEIEDQRAQDEDGNNILKRFHYEGGIKSYVEHL
NRSKEVIHPEPVFIEGEKDGISIEISMQYNQGFASNIYSFANNINTYEGGTHESGFRTAL
TRVINNYAARNNLLKDADGNLSGEDVREGLTAIVSIKHPDPQFEGQTKTKLGNSEARTIT
DQLFSEHFTKFMMENPQVARQIVDKGSMAARARLAAKKARELTRRKSALEVSSLPGKLAD
CSSRDPHISEIYVVEGDSAGGSAKQGRDRHFQAILPLRGKIINVEKARLDKILSNNEIRA
IITALGTGIGEDFDISKARYHKVVIMTDADVDGAHIRTLLLTFLYRYMRPIIEAGYIYIA
QPPLYKITQGKTVRYAYTDREMNRILSEMSPTPKPGLQRYKGLGEMNPEQLWETTMDPES
RTMLQVSLEDAIEADETFEILMGDKVEPRRMFIEENAAYVKNLDV
NT seq 1938 nt   +upstreamnt  +downstreamnt
gtggcaactgaagatacaaacatccaggcctatgatgagaatcagatacaggtgctagaa
ggtcttgaagcagtaagaaagcgtccgggtatgtatatcggatcaactgctgcaagagga
ctccaccacctggtgtgggaaatcgttgataatagtattgatgaggcattagcaggccac
tgtgacacaatttcaatcagaattactgaagataactggatcgaagttgaagataacgga
cgcggtattccggttggtacccatgaaaaaatgggtcgtccggctgttgaggttattatg
actgtgctgcacgccggaggtaaattcggcggtggcggatataaggtttcaggtggactt
cacggcgtaggggcttcagtcgttaacgcattgtctgaagagcttcaggtatatgtacac
cgtgacggtaatgtctatcaccagacttataaacagggtgtaccgcaatttgacctgaaa
gtcattggtgaaacggaccacacaggaacgattacacgctttaaagcggatcctgagatt
tttactgaaacgactgaatatgattttgatacgcttgcaaaccgcgtaagagaacttgct
ttcttaaaccgcggacttgcacttgaaatagaagatcagcgcgcgcaggatgaggacggc
aacaatatcctcaagcgtttccactatgaaggcggtattaagtcttatgtagagcacttg
aaccgttcaaaagaagtgattcaccctgagcctgtgtttattgaaggggaaaaagacggt
atttcaatcgaaatctctatgcagtataaccagggctttgcgagcaacatttattcattt
gccaataacatcaacacatacgagggcggtacgcacgaatcaggtttcagaacagccctt
acacgtgtgattaataactatgcggcgcgtaataatctgctaaaggatgcggatggcaac
ctttcaggtgaagacgtgcgtgaaggtctgactgcgattgtctctatcaagcaccctgac
cctcagtttgaaggtcagacgaagacaaagcttggtaactcagaagcaagaacaattaca
gatcaattgttctcagagcactttacaaagttcatgatggaaaaccctcaggtggcccgt
cagatcgttgataaagggtcaatggcagcacgtgcccgccttgcagcgaaaaaagcacgt
gagctgacgcgcagaaagagtgcgcttgaagtatcgagtctgcctggtaagcttgcggat
tgttcttcaagagatccccatatcagtgagatctacgtggttgagggtgactctgccggc
ggttcagccaagcagggccgtgaccgtcatttccaggcgatcctgccgctgcgcggtaag
atcatcaacgttgaaaaagcgcgtctggataaaattttatcgaataacgaaatccgtgcc
attattacggcacttggaacaggaatcggcgaggactttgatatttccaaagcccgttat
cataaagttgtcatcatgacagatgccgatgtcgacggtgcgcacatccgtacgctcctt
ttgacattcctataccgctatatgcgtccgatcattgaggcaggctatatctatattgca
cagccgccgctttacaaaatcacgcagggtaaaacagtccgttatgcttacactgaccgt
gaaatgaatcgcattctttcagaaatgtcacctactcctaagcctggccttcagcgctat
aagggtcttggagagatgaaccctgaacagctatgggaaacaacgatggatcctgaatca
cgtacaatgcttcaggtcagtcttgaagatgcgattgaagcagatgaaacctttgaaatt
ctgatgggcgacaaagtagaaccacgcagaatgttcattgaagaaaatgctgcctacgta
aaaaatctggacgtataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (48)   

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