KEGG   Jeotgalibacillus malaysiensis: JMA_01620
Entry
JMA_01620         CDS       T03570                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
jeo  Jeotgalibacillus malaysiensis
Pathway
jeo03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:jeo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    JMA_01620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:jeo03021]
    JMA_01620
   03400 DNA repair and recombination proteins [BR:jeo03400]
    JMA_01620
Enzymes [BR:jeo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     JMA_01620
Transcription machinery [BR:jeo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     JMA_01620
DNA repair and recombination proteins [BR:jeo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      JMA_01620
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 Dockerin_1 DUF961 SpoIVA_ATPase
Other DBs
NCBI-ProteinID: AJD89479
UniProt: A0A0B5ANA9
Position
159894..160838
AA seq 314 aa
MIEIEKPKIETVEISDDAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDS
VLHEFSTIEGVVEDVTTVVMNIKKLALKIYSDEEKTLEIDVQGDGQVTAADITHDSDVEI
LNPDLYIATVGKNGHLRMRLTASRGRGYTPADQNKREDLPIGVIPVDSIYTPVSRVNYQV
ENTRVGQLTNFDKLSLDVWTDGSIGPKEAVALGAKILTEHLNIFVGLTNEAQNAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELANKSEEDMMKVRNLGRKSLEEVK
AKLDELGLGLRKED
NT seq 945 nt   +upstreamnt  +downstreamnt
atgatcgaaattgaaaagccaaaaattgaaacggttgagatcagcgatgatgccaagtac
ggaaaattcgttgtagagccacttgagcgtgggtatggtacaacattgggtaactccttg
cgtcgtatcctattatcttcacttcctggtgcagcagtaacttcaattcagattgatagc
gtactgcacgaattttcaacgatcgaaggcgtcgtagaagatgtcacaacagttgtaatg
aatattaagaaactggcattgaagatctattcagatgaagaaaagacattggaaatcgat
gttcagggtgatggacaggtaactgcggccgatattactcatgatagtgatgtagaaatc
cttaacccggatctatatatcgcaacagtgggcaaaaacggtcaccttcgcatgcgttta
actgcatcaagaggacgcggttatacaccagcagaccagaacaagcgtgaagatttacca
attggagtgattccggttgattcaatctacacacctgtttcccgtgtaaactatcaggtt
gaaaacactcgtgttggtcagctgacgaacttcgataagctttcacttgatgtttggaca
gacggaagcattggcccgaaagaagctgttgctctaggtgctaagattctgactgaacac
cttaatattttcgttggattaacgaacgaagcacagaatgcagaaatcatggtagaaaaa
gaagaagatcagaaagagaaagtattggagatgacaatcgaagaacttgatctatctgtc
cgttcttacaactgcctgaagcgtgcaggaatcaacacagtccaggaactggctaacaag
tcagaagaggatatgatgaaagtgcgtaaccttggacgtaaatcccttgaagaagttaag
gcgaaattagatgaacttggattaggccttcgcaaagaagactaa

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