KEGG   Jeongeupia sp. USM3: BJP62_01890
Entry
BJP62_01890       CDS       T04552                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
jeu  Jeongeupia sp. USM3
Pathway
jeu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:jeu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BJP62_01890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:jeu03400]
    BJP62_01890
DNA repair and recombination proteins [BR:jeu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BJP62_01890
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG HHH_5 UVR HHH HHH_2 HHH_3
Other DBs
NCBI-ProteinID: AOY02160
UniProt: A0A1D9BIV5
Position
412569..414383
AA seq 604 aa
MIEHVKALPHLPGVYRYLDAEGAILYVGKALDLRKRVGSYFQKSDHGPRIRLMLAQVAKI
ETTVVRSEAEALVLENNLIKALSPRYNILFRDDKSYPYVMISGHASPRLAYYRGALDKRN
QYFGPFPNGYVVKESLQLLQKVFKLRTCEDTVFANRSRPCLLHQIKRCSAPCVGLISPEA
YRHDVDSAALFLSGKATELLDELQQQMQAASESWDFERAAMLRDQVQALAKIQEKQFVSS
NTSERDADIVACVVKDGMVCVNLAMVRGGRHVGDKNLFPSHADDYDAADALSAFLAQHYL
DRSVPPMVLCDPAPPDAEVIASLLSDQAGRAVRLNSNPNGERRVWLEMARKNAELAIALR
LGQSATQAGRLAALVEALNLPEETQRIECFDISHTMGELTVASCVVFDRGDMQPKEYRRY
NIPTSGEGAITGGDDYAAMKQVLERRYGKIAAGEGVVPDVILIDGGKGQLTQAEAVMAEV
GLTQPTLIGVAKGETRKAGLEQLILATTHEVKHLKRDHPGLHLVQQIRDESHRFAITGHR
ARRAKARVASSLEDIDGVGPKRRQRLLARFGGLQGVKAASVDDLMLVDGINAALAEKIYA
ALRG
NT seq 1815 nt   +upstreamnt  +downstreamnt
ctgatcgagcacgtcaaggcgctgccgcacctgcccggtgtgtaccgctacctcgatgcc
gaaggggccatactctacgtcggcaaggcactcgacctgcgcaagcgcgtcggttcgtac
ttccagaagagcgaccatggcccgcgcatccggctgatgctggcgcaagtcgcgaaaatc
gagacgacggtcgtgcgcagcgaagccgaagcgctcgtgctcgagaacaacctgatcaag
gcgctttcaccgcggtacaacatcctgttccgcgacgacaagagctatccctacgtgatg
atcagcggccacgcgtcaccgcggctggcctattaccgcggcgcgctcgacaagcgcaac
cagtacttcgggccgttcccgaacggctacgtggtgaaggagtcgctgcagctgctgcag
aaggtgttcaagctgcgcacctgcgaggacacggtgtttgccaatcgctcgcgcccctgt
ctgctgcaccagatcaagcgctgctcggcgccgtgcgtcggcctgatcagcccggaggcg
taccggcacgatgtcgacagcgcggcgctgttcctcagcggcaaggccaccgagctgctg
gacgaactgcagcagcagatgcaggccgcgtcggaaagctgggatttcgaacgggcggcg
atgctgcgcgatcaggtccaggcgctggccaagattcaggaaaaacagttcgtctccagc
aacaccagcgagcgcgatgccgacatcgtggcctgcgtcgtcaaggacggcatggtctgc
gtgaacctggcgatggtgcgtggcggacgccacgtcggcgacaagaacctgttccccagt
catgccgatgactacgacgcggccgacgcgttgtcggccttcctggcgcagcactatctc
gatcgcagcgttccgcccatggtgctgtgcgaccccgccccgcccgatgccgaggtgatc
gcctcgctgctgtcggaccaggcgggacgtgcggtgcggctcaacagcaacccgaatggc
gagcgcagggtctggctggagatggccagaaagaacgccgagctggcgatcgcgctcagg
ctcggccagtccgcgacgcaggccggccggcttgcggcgctggtcgaggcgctgaacctg
cccgaagaaacgcagcggatcgagtgtttcgacatctcgcacacgatgggcgaactgacc
gttgcatcctgcgtggtgttcgaccgcggcgacatgcagccgaaggaataccgccgctac
aacatccccacgagtggtgaaggggccatcaccggcggcgacgactatgccgcgatgaag
caggtgctcgagcgccgttacggcaagatcgccgccggagagggcgtggtgcccgacgtg
atcctgatcgacggtggcaagggtcaactgacgcaggccgaggcggtgatggccgaagtc
gggctgacgcagccgacgctgatcggcgtcgccaagggcgaaacacgcaaggccgggctc
gagcaactgattctggcgacgacgcacgaggtcaaacacctgaagcgcgaccatcccggc
ctgcatctggtgcagcagatccgcgacgagtcgcaccgcttcgcgatcaccggccaccgg
gcgcgccgcgccaaggcgagggtggcgtcgagcctcgaggacatcgacggtgttggcccg
aagcgccggcagcggctgctggcgcgctttggcgggttacagggcgtgaaggcggcgagt
gtcgacgacctgatgctcgtcgacggcatcaacgccgcgctggccgagaagatctacgcg
gcgctgcgcggctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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