KEGG   Janthinobacterium lividum: G3257_03635
Entry
G3257_03635       CDS       T06723                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
jlv  Janthinobacterium lividum
Pathway
jlv02020  Two-component system
jlv02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:jlv00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    G3257_03635
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    G3257_03635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:jlv03021]
    G3257_03635
Transcription machinery [BR:jlv03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     G3257_03635
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38 HTH_IclR Xre-like-HTH HTH_Crp_2 HTH_23 AAA_18
Other DBs
NCBI-ProteinID: QKY01444
UniProt: A0A7H8RGR7
Position
826361..827839
AA seq 492 aa
MKQSLQLRTSQHLALTPQLQQSIRLLQLSTLELHQELEQLLTDNPLLERLDDPLDRSLRL
LSDGALSSTAAPAEAPPQPPGQEVPAAPAEAETFDGDAGEGPAAADGGDSDWSEASRGKA
PDDEDSRPQLEAHHCTLREHLMEQMRVTVLELRDRALVELIIDALDDNGYLEESLDDILA
RLPEELEIDVDEMRTALSLLQSFDPPGVGARNASECLALQIKRLPHIAMVTRRMALVIVE
KHLAWFAQRDFNKLKKALDCDDEDLREAQTVIRQCNPHPGAVFASDVSDYVVPDVVVKRA
RNGWQVTLNNDVMPRLRVNAMYANLLKQGKGEGAMGAQLQEAKWLIKNMRQRFDTILRVA
QAIVERQKNFFSHGAVAMRPLVLREIADTLGLHESTISRVTTQKYMLTPHGMFELKYFFG
SHVATEAGGEASSTAIRALIVQLTGAEDPKNPLSDSKIADMLGEQGMVIARRTVAKYREA
LKIPPVSLRKCL
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgaaacaatcattgcagctgcgcacttcgcagcacctggcactgacgccgcagttgcag
caatcgatacgcctgttgcaattgtctaccctggaattgcatcaggaattagagcaattg
ctgacggacaatcccttgctcgaacgcctcgacgatccgctcgaccgttcgttgcgcctg
ctgtccgacggcgccttgagttccacggccgcgccggccgaagcgccgccccagccgcca
ggccaggaggtgcccgcagcgccggccgaagcggaaacctttgatggcgatgccggcgag
ggtccggccgccgcggatggcggcgacagcgactggagcgaggcgagccggggcaaggct
cccgacgacgaagattcgcgtccgcaactggaggcccatcactgcaccctgcgcgaacac
ctgatggagcagatgcgagtgacggtgctcgaattgcgcgaccgcgcgctggtcgagctg
atcatcgacgcgctcgacgacaatggctacctggaagagtcgctcgacgacatcctggcg
cgcctgccggaagagctggaaatcgacgtcgacgagatgcgcacggccttgtctctcttg
caaagtttcgatccgcccggcgtgggcgcgcgcaatgcgtccgaatgcctggcgctgcaa
atcaagcgcttgccgcatatcgccatggtgacgcgccgcatggccctcgtcatcgtggaa
aagcacctggcctggtttgcccagcgcgatttcaacaagctgaaaaaagccctcgattgc
gacgatgaagacttgcgcgaagcgcagacggtgattcgccagtgcaatccgcatccgggc
gccgtgttcgcctcggacgtgtccgattacgtggtgcccgacgtcgtcgtcaagcgcgcg
cgcaatggctggcaagtgaccttgaacaacgatgtcatgccgcgcctgcgcgtcaatgcc
atgtacgccaacttgctcaagcagggcaagggcgagggcgccatgggcgcacagttgcag
gaagccaagtggctgatcaagaatatgcgccagcgcttcgacacgatcctgcgcgtggcg
caggcgatagtagaaagacaaaagaactttttctcgcatggggccgttgccatgcgtccc
cttgtgctccgtgaaatagctgatacactgggtttacacgagagtactatctcgcgggta
acaactcaaaagtacatgctgaccccgcacggcatgttcgagttgaaatatttctttggt
agccacgtcgccaccgaagcggggggcgaagcgtcatcgacggcgatacgggcattgatc
gtgcaactgacaggagcagaagaccctaaaaatcctttatccgacagtaagattgcggac
atgctgggggaacaaggcatggtgattgcgcgacgtactgttgccaaataccgggaagcg
ttgaaaattccgccagtgagcctgcgtaagtgtttgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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