KEGG   Juglans regia (English walnut): 108984682
Entry
108984682         CDS       T05245                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
  KO
K03131  transcription initiation factor TFIID subunit 6
Organism
jre  Juglans regia (English walnut)
Pathway
jre03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    108984682
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:jre03021]
    108984682
   03036 Chromosome and associated proteins [BR:jre03036]
    108984682
Transcription machinery [BR:jre03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     108984682
   Coactivators
    SAGA/TFTC/STAGA complex
     108984682
Chromosome and associated proteins [BR:jre03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     108984682
    STAGA complex
     108984682
    TFTC complex
     108984682
    SAGA complex
     108984682
    SLIK complex
     108984682
SSDB
Motif
Pfam: TAF6_C TAF Histone TFIID-31kDa CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 108984682
NCBI-ProteinID: XP_035542972
UniProt: A0A6P9EJQ2
Position
2:36601208..36607484
AA seq 537 aa
MSVVPKEAIEVVAQSIGITNLSPDVALALAPDVEYRVREIMQEAIKCMRHSKRTSLTADD
VDSALKLRNVEPIYGFTPGDPLRFKRAVGHKDLFYIDDKDVEFKDVIEAPLPKAPLDTSV
TSHWLAIEGVQPAIPENAPVEALAATSDGKKSEYTEDRLPIDIKLPVKHVLSRELQLYFE
KVTELTVNKSGSVLFKQALLSLATDAGLHPLLPYFTYFIADEVTRNLNNYSVLFALMRVV
RSLLQNPHIHIEPYLHQLMPSVITCLVAKRLGNRSSDNHWELRDFTANLVASICQRFGHV
YHNLQPRVTRTLLHAFLDPTKALSQHFGAIQGLAALGPSVVRMLILPNLEPYLQLLVPEM
LLEKQKNEMKRREAWRVYGALLCAAGQCMYDRLKMFRTLLSPPTRAVWKINGKVVTTMRN
KRKASTDNLMQQQPLKKIATESTMGVVPMNSMQGTTVGYSTAVGGSSTGLSSMSRQLPAE
NISGRGEIGGRAVKVSTVLSQAWKEDMDAGHMLGSLFEFFGESLFSFTPKPELAFFL
NT seq 1614 nt   +upstreamnt  +downstreamnt
atgagcgttgtcccaaaggaggcaattgaggtcgttgcacagagcattggaattaccaat
ttgtcccccgatgttgccctcgctctcgctcccgacgtcgagtaccgcgttcgagagatc
atgcaggaggcgattaaatgcatgcgccactcaaagcggactagtctgacggctgatgat
gtggatagtgcacttaagttaagaaatgtggagccaatatatggctttacacctggagat
cccctgaggttcaaaagggctgttggacacaaggatttattctatattgatgacaaggat
gtggaatttaaagatgttattgaggcgcctttaccaaaagcaccacttgatacgtcagtt
acctctcactggctggcaattgaaggtgttcaacctgcaattccagaaaatgctccagtt
gaagcacttgcggcaacttctgatggaaaaaaatctgagtacacagaagatagacttccc
attgacattaaattacctgttaagcatgttctatcaagggagcttcagctgtactttgaa
aaagtcacagaactaactgtgaataagtctggctctgtcctcttcaaacaagcattgttg
agcttggcaacagatgcaggactgcatcctttactcccgtacttcacatacttcattgct
gatgaggttacacgtaatttgaacaattattctgtcctgtttgctttgatgcgtgttgtt
cgaagccttcttcaaaatccacacattcatatagaaccttatctacaccaattgatgcca
tctgttattacatgccttgttgcgaaaagattagggaatagatcttctgacaatcattgg
gagcttagggactttacagcaaacctggttgcttcaatatgccaaagatttgggcacgtt
tatcacaaccttcagccacgtgtcacaaggactctgctccatgctttcttggacccaacc
aaagcattgtctcaacactttggtgcaattcaagggctagcagcccttggacccagcgtg
gttcgtatgcttatattaccaaatcttgagccatatttgcaacttctggttccagaaatg
ctgcttgagaagcaaaagaatgagatgaagaggcgcgaagcttggcgtgtttatggtgcc
ttgctgtgtgcagctggccaatgcatgtacgatcggctcaagatgtttcgcactctgctt
tcaccaccaactcgtgcagtctggaagatcaatggaaaagttgtgactacaatgcgaaat
aaacgcaaggccagcacggacaacttaatgcagcaacaaccactcaagaaaatagcaact
gagagcacaatgggtgtggtaccaatgaactccatgcaagggacaacagttgggtattcc
actgctgtaggaggttccagcactggtttgtcatcaatgtctcggcagttaccagctgaa
aacatttctggaaggggggagattggtggtagggcggtaaaagtttctaccgttctttct
caggcttggaaggaggacatggatgcaggacatatgttggggtctttgtttgaatttttt
ggtgaaagtctgttttcttttaccccaaaacccgagcttgccttcttcttgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

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