KEGG   Juglans regia (English walnut): 108986744
Entry
108986744         CDS       T05245                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
jre  Juglans regia (English walnut)
Pathway
jre03020  RNA polymerase
jre03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108986744
  09124 Replication and repair
   03420 Nucleotide excision repair
    108986744
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:jre03021]
    108986744
   03400 DNA repair and recombination proteins [BR:jre03400]
    108986744
Transcription machinery [BR:jre03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     108986744
  RNA polymerase III system
   RNA polymerase III
     108986744
  RNA polymerase I system
   RNA polymerase I
     108986744
DNA repair and recombination proteins [BR:jre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      108986744
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 108986744
NCBI-ProteinID: XP_018815016
UniProt: A0A2I4E6J8
Position
1:complement(38552102..38562481)
AA seq 206 aa
MMLSEEEITRLFRIRRTVMQMLKDRGYFVGDFEIDMTKEQFKDKYGESMKREDLVINKAK
RNDSSDQIYIFFPDEPKVGVKTMKTYSQRMKSENVFRAILVVQQNLTPFARSSISEISTK
FHLEVFQEAELLINIKDHVLVPEHQVLTNEEKKTLLERYTVKETQLPRMQVTDPVARYYG
LKRGQVVKIIRPSETAGRYVTYRYVV
NT seq 621 nt   +upstreamnt  +downstreamnt
atgatgctgtcggaagaggaaattactaggcttttcaggatccgaagaacagtaatgcaa
atgctgaaggaccggggttattttgttggggactttgagattgacatgaccaaagagcag
ttcaaggataaatatggtgagagcatgaaaagggaagaccttgttatcaataaagccaag
agaaatgatagctctgatcagatctatattttcttccctgacgagccaaaggttggtgta
aagacaatgaagacttattcccagcgcatgaagtcagagaatgttttcagggcaatcttg
gtggttcaacaaaatttgactccctttgctcggagctctataagtgagatttctacgaaa
ttccacctcgaggttttccaggaggcagagttgttgataaacatcaaagatcatgttctt
gttcctgagcatcaggtgcttacaaatgaggagaagaaaactttgctggagagatacact
gtgaaagaaacacagctgcctcgtatgcaagtgactgaccccgttgcgagatattatggg
ctgaagcgtggacaagttgtgaagatcatccgaccaagtgaaacagctggtcgatatgtc
acttaccgatatgttgtgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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