KEGG   Juglans regia (English walnut): 108990496
Entry
108990496         CDS       T05245                                 
Name
(RefSeq) transcription initiation factor IIA large subunit-like
  KO
K03122  transcription initiation factor TFIIA large subunit
Organism
jre  Juglans regia (English walnut)
Pathway
jre03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    108990496
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:jre03021]
    108990496
Transcription machinery [BR:jre03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIA
     108990496
SSDB
Motif
Pfam: TFIIA PBP1_TM
Other DBs
NCBI-GeneID: 108990496
NCBI-ProteinID: XP_018820031
UniProt: A0A2I4EKV4
Position
14:8403943..8411559
AA seq 396 aa
MAASTTSNVYIQVIEDVINKVRDEFVNNGGPGEDVLKEFQGTWEAKMIQAGVVIGPIDRT
GALKPTPGGPITPVHDLNVPYEGTEEYETPTAEMLFPPTPLQTPSQTPLPGTAENSMYNI
PTGPSDYPTPGNDTGGGGGNNNNNNEAKGGRPSPFMQPPSPWINQRAPLDVNVAYVEGRD
EVDRGASHQPLTQDFFVAPSGKRKREDFSSQYHAGGFIPQQDGAGDATLEVFEIEVSGGS
ASLGGHCIVTTANKETLAYVRESSSKIPQLDGPIPDPYDDVLSTPNIYNYQGAYNEDYNI
ANTPAPTDIPAGTPAVVAQNDVVEDDDDEPPLNENDDDDFDDVDEGEEQNTQHLVLAQFD
KVTRTKSRWKCLLKDGIMHINNKDILFNKATGEFEF
NT seq 1191 nt   +upstreamnt  +downstreamnt
atggcggcttcaacgacgagcaacgtctacatccaggtcatcgaggatgtcatcaataag
gtccgggatgagttcgtgaacaacggtggccccggagaggacgttctcaaggagtttcaa
ggaacttgggaggcgaaaatgattcaagccggtgtagttattggtccaatagataggacc
ggtgccctgaagcccacacctgggggtcctatcactcccgttcacgatcttaatgtgcca
tacgaagggactgaggagtatgaaactccgactgctgagatgctctttcctccgacgccg
ttacagactcccagtcagacacctttgccaggaacagcagaaaactctatgtataacatt
cctactggacctagtgactatcctactccaggaaatgatactggcggcggcggcggcaac
aacaacaacaataatgaggcaaaaggtggaagacctagtcccttcatgcaacccccgtca
ccttggataaaccaaagggccccacttgatgttaatgttgcttacgtggaagggcgggat
gaggtggacagaggagcctctcatcaacccctgacacaggacttctttgtggctccttct
ggaaagcgaaaacgtgaggatttttcttcgcagtatcatgctggtggattcatacctcaa
caagatggggctggggatgctacattagaggtgtttgagattgaggtaagtggagggagc
gcatctctgggtggacattgcatagtcaccactgcaaataaagagaccttggcgtatgtc
agagaatctagttcaaagattcctcaacttgatggaccaattcctgatccttatgatgac
gttctgtctactcccaacatatacaattatcaaggagcttacaatgaagactacaacata
gcaaacacacctgctccgacagacattccagcaggtactcctgctgtagttgctcaaaat
gatgttgtagaggatgatgatgatgaacccccattgaatgaaaatgatgatgatgatttc
gatgatgtggacgaaggagaggagcagaacacacagcatttggttttggctcagtttgat
aaggtgacacgtaccaagagcagatggaaatgcttactgaaggatggcattatgcacata
aacaataaggacattctctttaacaaggcaacaggagaatttgaattctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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