KEGG   Juglans regia (English walnut): 108992842
Entry
108992842         CDS       T05245                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 14 isoform X1
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
jre  Juglans regia (English walnut)
Pathway
jre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108992842
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:jre03041]
    108992842
   03009 Ribosome biogenesis [BR:jre03009]
    108992842
Enzymes [BR:jre01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     108992842
Spliceosome [BR:jre03041]
 Complex A
  U1 snRNP components
   U1 related factors
    108992842
 Complex B
    108992842
Ribosome biogenesis [BR:jre03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    108992842
SSDB
Motif
Pfam: DEAD Helicase_C ResIII WW ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 108992842
NCBI-ProteinID: XP_018823062
UniProt: A0A2I4EUH5
Position
1:3383133..3397341
AA seq 734 aa
MAATVTISSTGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYEKPTGSVPPPKS
SSVPISSSVLVQQSSQGQLCGYSPDENDSYGRGSNGGSKFEVESRMQQNTRGETVHSSNT
ANGTLGAGPGGSSTRVHGASDVGVGFCAESYRRRHEITVTGDNAPPPFMSFEATGFPSEI
LREVHNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRCRNNPQL
GPTVLVLSPTRELATQIQDEAVKFGKSSRILCTCLYGGAPKGPQLRDIDRGSDIVVATPG
RLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVTEVPPRRQTLMYTATWPKEV
RKIAADLLVNPVQVNIGNVDELVANKSITQHVEVLAPMEKHRRLEQILRSQEPGSKIIIF
CSTKKMCDQLARNLTRQFGAAAIHGDKSQGERDHVLSQFRNGRSPILVATDVAARGLDVK
DIRVVINYDFPTGVEDYVHRIGRTGRAGATGLAFTFFGDQDAKYASDLIKVLEGANQQVP
PEIRELASRGGGIGRSRRWGSGSGFSGRDGGRGGRNDSGHIGRGGWGFSSPSSGQPERSG
GRGYEHESHERYDRGYSYGQDRGRSRSPSPSKGSAWGEHSKGWNRDRSRSRDRSPVRSFH
QAMMERGRSSPPHQRQRVPPYNSGNAREPKGSPQGWGRSSGGGQDAGGFANGPHSSYFGE
EEEEGLIPQDEVDK
NT seq 2205 nt   +upstreamnt  +downstreamnt
atggctgccactgtgaccatctcttccacaggtccacgatatgcacctgaggatcccacg
ctccccaaaccatggagaggccttgttgatggtaaaactgggtacctttacttttggaat
cctgagacgaatgtcactcaatatgagaagcctacagggtcagttcctccaccaaagtct
tcttcggttcctattagttcttcggtattagttcaacaatcttctcaaggacagctttgt
ggctacagtcctgatgaaaatgatagttatggcaggggcagcaatggtgggtcaaagttt
gaggttgagtcaaggatgcagcagaatacaagaggtgaaactgtccattccagtaatact
gcaaatgggacacttggtgctggacctggtggatcttctacacgagtacatggagcttca
gatgtaggagttggtttttgtgcagagtcttatcgtcgccggcatgaaataactgttact
ggcgataatgcgcctccaccttttatgtcatttgaagctactggctttccatctgagatt
cttagagaggtacacaatgctgggttctctgccccaactccgattcaggcacaatcatgg
ccgattgctcttcaaagtagagacatagtggccattgccaaaaccggttccgggaaaacc
ttgggttacttgattccgggatttattcatctcaagcgctgccgtaacaaccctcaattg
ggtccaactgtgttggttttgtcgccaactagggagttggcaacacagatacaagatgaa
gctgtgaagtttggaaagtcatcaagaattttgtgcacgtgtttatatggaggagctcca
aagggaccccagttgagagatatagatagaggatcggatatagtggttgctacccctggt
cgcttgaatgatattctggagatgaagagaattagccttcatcaagtttcttacctcgtg
cttgatgaggctgatcgcatgcttgacatgggttttgaacctcagataaggaagattgta
acggaggtgcctcctcgccgccaaaccctcatgtatacagcaacatggccaaaggaggtt
cggaaaattgcagcggatctgctcgtcaatcctgttcaggttaacattggcaatgtagat
gagcttgtcgcaaacaagtccatcacgcagcatgttgaagtattggcacccatggagaaa
cacaggcgactggagcagatactgcgatctcaagaaccaggatcaaagattatcatcttt
tgttcgaccaagaagatgtgtgaccaacttgcccgcaatcttacccgccagtttggtgct
gctgccattcatggagacaaatctcagggtgagagggatcatgtgttgagtcagtttcga
aatggtaggtctccaattcttgtagccactgatgttgctgctcgaggactggacgtcaag
gacatcagggtggttatcaactatgatttccctacaggagtggaggattatgttcatagg
attgggaggacagggagggcaggcgccacaggtctggcttttacattctttggtgaccag
gatgccaaatatgcttcagatctcatcaaagttttggaaggggcaaatcagcaagtcccc
ccagaaattcgtgaactggcatcccgtggtggtgggataggtaggtcaagacgttggggt
tctggttctgggttcagtggtcgtgatgggggccgcggtggacgtaatgattcaggtcat
attggaagaggtgggtggggattttcttctccctcttctggacagccagaaagaagtgga
ggccgtggatatgagcacgagtcacatgagaggtatgatcgtggttacagctatggacaa
gatagaggtcgcagtcgcagccccagccctagcaagggttctgcctggggtgaacacagt
aaaggttggaaccgtgatcgtagccgtagtcgtgaccgctccccagtgcgcagttttcac
caggcaatgatggaacgagggaggtcatccccaccacatcaacgccagcgtgtgccacct
tacaacagtgggaatgcaagggaacccaagggttcaccacaggggtggggcagatcctcg
ggtggtgggcaggatgctggaggatttgccaatggacctcactcttcttattttggagaa
gaagaggaggaaggcttgatacctcaggatgaggttgacaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (54)   
   KEGG ORTHOLOGY (1)   
   RefGene (50)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (74)   

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