KEGG   Juglans regia (English walnut): 108998027
Entry
108998027         CDS       T05245                                 
Name
(RefSeq) exonuclease 1 isoform X1
  KO
K10746  exonuclease 1 [EC:3.1.-.-]
Organism
jre  Juglans regia (English walnut)
Pathway
jre03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    108998027
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:jre03032]
    108998027
   03400 DNA repair and recombination proteins [BR:jre03400]
    108998027
DNA replication proteins [BR:jre03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    108998027
DNA repair and recombination proteins [BR:jre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     108998027
SSDB
Motif
Pfam: XPG_N XPG_I XPG_I_2 5_3_exonuc TPR_1 MIT HHH_5 TPR_2
Other DBs
NCBI-GeneID: 108998027
NCBI-ProteinID: XP_018829995
UniProt: A0A2I4FEC2
Position
3:13097050..13113863
AA seq 694 aa
MGIQGLLPLLKSIMAPIHVKELEGCSVAVDTYSWLHKGALSCSRELCKGLPTTRHIEYCM
HRVNLLRHCGIKPILVFDGGLLPMKSEQENKRARVRKENLARGIEHESDGNSAAAYECYQ
KAVDISPLIAHELIQVLKQENVSYIVAPYEADAQMTFLAIGKQVEAVITEDSDLIPFGCP
RIIFKMDKFGQGVEFRYSMLQQNKELSFAGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH
ALIKKFKSYDRVIKHLRYSTVSVPPLYEESFKKAILTFQHQRVYDPVNEDIVHLSDISDN
SRDDLDFLGPLIAKHTAKGIAEGNLDPFTKTPIQGENVTAPMVLDRTSQCKQFNPERAGK
KLDLPVQKNLLTKYFCFASLEAKRKFRAPRMSPNHPSPDDDSSFIPEENVIEEAAVCKMD
CLPESPLDSKNTGTALPANYLVEDSFATKISVHSESPTHDMSPETRSPEQTLLQQPRYSI
HKPCTALQKERECKNVPDAVEGKTRTETRKVVIRSSYFQHKSENQSKPNNEQQKAKNDGV
VDIHKNSIPEDYSFRNNHVMDMVRKRKSSLNDCIKKEDVQPKHRRGDVSLTENGHHAPEL
SATSSETVAEEKFGSNISHLSRYSEIAEKSIESFVSVITSFRYTSSGSRASGLRAPLKDV
RNTCTNRPAAAGMDFSQFEYVPNKQKAGLASRRA
NT seq 2085 nt   +upstreamnt  +downstreamnt
atggggattcaggggcttttgccgctactgaagtcgatcatggccccaatccatgtcaag
gaattggagggctgttctgttgcggtcgacacctattcttggctacacaagggcgccttg
tcttgcagcagagagctctgcaaaggcctacccaccaccaggcacattgaatattgcatg
catagagtgaatctgctccggcattgtggcattaaacctattcttgtatttgatggaggt
cttctgccaatgaagagtgaacaagagaacaagcgtgccagggtgaggaaggaaaatctt
gcacgtggtattgagcatgagtcagatggaaattctgcagctgcttatgagtgctaccag
aaagctgttgatatttcacctttgattgcgcatgaactaatccaggtgttaaaacaggag
aatgtgtcttatattgtggctccttatgaggcagatgcccaaatgaccttcttggccatt
ggcaaacaggttgaagcagttattactgaggactcagatcttataccatttggttgtcct
agaatcatctttaagatggacaaatttgggcaaggtgttgaatttcgatattccatgcta
cagcagaacaaggagctcagttttgccggtttcacgaagcagatgcttctagagatgtgt
attctgagtggatgtgactacttgcagtcattaccaggaatgggcctgaaaagggctcat
gcattaatcaagaagttcaaaagttacgacagggtaattaaacacttgaggtacagcact
gtttctgtccctccattatatgaagaatcattcaagaaagcaatattgactttccagcat
caacgggtatatgatcctgtcaatgaagatattgttcatttgtctgacatatctgataac
agcagggatgatttggacttcctaggcccattaatagcaaaacatacagcgaaaggcatc
gcagaaggcaatcttgatccatttacgaaaactccaattcagggagagaatgttactgct
cccatggtgcttgacagaacttcccaatgtaaacaattcaatcctgaaagagcgggtaaa
aagctagatttgccagttcagaagaatcttttgaccaagtatttctgctttgcatccctt
gaagcaaagagaaaattcagagctcctcggatgtcacctaatcatccaagtccagatgat
gattcttcttttattcccgaggaaaatgtcattgaggaagctgctgtatgtaaaatggac
tgcttgccagaatccccgcttgactccaaaaacacagggactgcccttcctgcaaactat
cttgtagaagatagttttgccactaaaatttcagtgcattcagaatctccaacccatgat
atgagccctgagacaagaagtccagaacaaactctactacaacaacccaggtattcaatt
cataaaccttgtacagcattgcagaaggagcgtgagtgtaagaatgttccagatgcagtt
gagggcaaaacaagaacagagacaaggaaggttgtgataaggagttcttactttcagcat
aagtcagaaaaccagtcaaaaccaaataatgagcaacagaaggcaaagaatgatggtgtt
gttgatatacacaagaatagcatacctgaggattattctttcagaaataaccatgttatg
gatatggttaggaaaaggaagagctccttaaatgactgcattaaaaaagaagatgtgcaa
cccaagcacaggcgtggagatgtatcccttaccgaaaatggtcaccatgctcctgaactc
agtgcaacatcttcagagacagtagctgaagaaaagtttggatccaacatttcccattta
agccgatattctgaaatagctgagaaatcaatagaaagttttgtttcagtaataacgtca
tttagatacacgtcatctggttctcgagcaagtggtctccgtgctcctctaaaagatgtt
cgaaatacttgtaccaataggcctgctgctgctggcatggactttagccaatttgaatat
gtaccaaataagcagaaggctggcttggcatcacgtagagcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (8)   
   Pfam (8)   
All databases (34)   

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