KEGG   Juglans regia (English walnut): 108998594
Entry
108998594         CDS       T05245                                 
Name
(RefSeq) serine/arginine-rich splicing factor RS40-like isoform X1
  KO
K12893  serine/arginine-rich splicing factor 4/5/6
Organism
jre  Juglans regia (English walnut)
Pathway
jre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108998594
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:jre03041]
    108998594
Spliceosome [BR:jre03041]
 Common components
  Common spliceosomal components
   SR proteins
    108998594
SSDB
Motif
Pfam: RRM_1 RRM_5 RNA_bind Nup35_RRM_2 Nup35_RRM DUF2129
Other DBs
NCBI-GeneID: 108998594
NCBI-ProteinID: XP_018830721
UniProt: A0A2I4FGE3
Position
1:9011101..9015820
AA seq 433 aa
MLSSHDRLCFSVNPKIILVIFSPLGFWRTILNFFRLFSGHCLRKEKMRPIFCGNFEYDAR
PSDLERLFSRYGKVERVDMKSGFAFIYMEDERDADDAIRRLDRTEFGRKGRRLRVEWTKH
ERGIRRPGGSKRSSASTKPSKTLFVINFDTHYTRTRDLEKHFEPYGKLVSVRIRRNFAFV
QYESQDDATKALDATNMSKLLDRVISVEYAVRDDDDERRNGHSPDRFHDRSLDRGRDRRR
SPSPYRRERGSPDYGRGSSPSRKERGSPDYGRDRSPSPYRRERGSPEYGRARSRSPQRER
VGRDHRHSSSHSPYQTERVSADVGHGAGHSPYARERASADHGRGPSRSPYGRAGASPDNG
RDPSRSPYGRERASPENGHGPSRSPYGREKANPDSIHEVSPIPEPREDSPNYGGGPDTPV
HERYQSRSPPTEE
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgctttcatcacacgataggctttgcttttcggtcaatccaaaaataattctcgtaatc
ttctctcctttagggttttggagaacaattctcaatttcttccgacttttttccggtcac
tgccttcgaaaggaaaaaatgaggccaatcttctgtgggaattttgagtatgacgctcga
ccgtctgatctggaacggcttttcagtagatatgggaaggttgagagggtggatatgaag
tctggatttgcttttatttatatggaggacgagagagatgctgatgatgctattcggaga
cttgaccgaacagaatttggtcgaaagggacgcaggcttcgtgttgaatggacaaaacat
gaacgtggcattagaaggcctggaggttccaaaagatcttcagctagtacgaaaccttca
aagactttgtttgttattaattttgatacacactatacaaggactagggacttggagaag
cactttgaaccatatggaaagttagtgagtgtgaggattagaaggaactttgcatttgtg
cagtatgaatcacaggatgatgccacaaaagcattggatgcgacaaacatgagcaaattg
ctggatcgagttatatcagtggaatatgcagtccgggatgatgatgatgaacggagaaat
gggcatagccctgatagatttcatgataggtcattggatagaggtcgtgatagaaggcga
tcccctagcccatatcgaagagagaggggtagccctgattatggacgtggctctagtccc
tctaggaaagagagaggcagccctgattatgggcgtgatcgcagtccaagtccctatcga
agagagaggggtagtcctgagtatggtcgtgcacgcagtcgtagtcctcaaagagagagg
gttggccgtgatcatcgccacagttccagccatagtccctaccaaacagaaagggtgagt
gctgatgttggtcatggcgccggtcacagtccttatgcaagagagagggcaagtgctgac
catggtcgaggccctagtcgcagcccttatggaagagcgggggcaagccctgacaatggt
cgtgaccccagccgcagtccttatgggagagagagggctagtcctgaaaatggtcatggc
cccagccgtagtccgtatggaagagagaaggctaaccctgacagtattcatgaagtcagc
ccaatacctgaacctagagaggacagccccaattatggtggtggtccagatacccctgtg
catgagagatatcaaagtcgatcaccaccaacagaggagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (6)   
   Pfam (6)   
All databases (43)   

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