KEGG   Juglans regia (English walnut): 109003574
Entry
109003574         CDS       T05245                                 
Name
(RefSeq) lysine--tRNA ligase, chloroplastic/mitochondrial
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
jre  Juglans regia (English walnut)
Pathway
jre00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    109003574
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:jre01007]
    109003574
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:jre03016]
    109003574
Enzymes [BR:jre01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     109003574
Amino acid related enzymes [BR:jre01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   109003574
Transfer RNA biogenesis [BR:jre03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    109003574
 Prokaryotic type
   Other AARSs
    109003574
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-GeneID: 109003574
NCBI-ProteinID: XP_018837319
UniProt: A0A2I4G099
Position
14:28424016..28432900
AA seq 589 aa
MEALKVSSQPFRHLFRFATSTASAATRSRIGFLRCSSSSSSSSSSAAIATTTSGRNRRSS
SSSSTSDRDAVRSIRITKVEELRSKGLEPYAYKWDRTHTANQLQDMYRHLGNGVESNSES
DHVSIAGRIVARRAFGKLAFLTLRDDSGTIQLYCEKERLVNDQFDQLKTLVDIGDILGAS
GSIKRTEKGELSIYVNSFAILTKSLLPLPDKYHGLTDVDKRYRQRYVDMIANPEVADIFR
KRAKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLK
RMLVGGFEKVYEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYQSMMNMVEEIVTRCALSV
HGKLTIDYQGVEICLERPWRRETMHNLVKESTGIDFNDLVNDVKAAKEITLRALEINLDK
KDKCSIEACPSVGHLLNEVFEIVVEPKLLQPTFVLDYPIEISPLAKPHRRHAGLTERFEL
FICGRELANAFSELTDPMDQRGRLEEQVRLHNEKRAAAAMEANSAEERGNKNEDDSYEVT
LDDDFLTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPVLKIQQ
NT seq 1770 nt   +upstreamnt  +downstreamnt
atggaggctttgaaggtgagctcgcagcctttcagacacctctttcgcttcgcaacttct
actgcctccgctgccacacgctccagaattggatttctcaggtgctcctcctcctcctcc
tcatcatcatcttccgccgccatcgcaaccactacctccggccgtaaccgtcgatcttct
tcttcttcttccacttcggacagagacgccgttcgctccattcgcattactaaggtggaa
gaattgaggagcaagggcttggagccgtatgcttataagtgggataggactcacactgct
aaccagctgcaagatatgtacagacatcttgggaatggcgtcgagtcgaatagtgagagc
gatcatgtttcgattgcaggaagaattgtggctcgcagagcattcggaaaactcgcattt
ttgacgttacgcgatgattccgggacaattcagctttattgcgagaaggagaggcttgta
aatgatcaatttgatcagttaaagacacttgttgatattggtgatatactaggtgcaagt
ggttcaatcaagcggacagagaaaggagaactttctatttatgtgaattcatttgccatt
ttgaccaaatctctacttccactgccggataaatatcatggtctaactgatgtggataag
cgctaccgccaaagatatgtagacatgattgccaatcctgaagtagctgatatatttcgg
aaaagagcaaagattgtgtcagagatacgcaagacagtggaatctttaggtttcgttgaa
gttgaaactccagttctgcagggagcagctggtggagcagaagctaggccatttgttaca
taccataattctcttggaagggacctttatttgagaatagcgactgagcttcacttaaag
agaatgctggttggggggtttgaaaaggtatatgagattgggagaatatttagaaatgaa
ggcatttcaactcgtcataatcctgagtttaccacaatagagatgtatgaagcatattca
gactaccaaagcatgatgaacatggtggaggaaattgttactagatgtgctctttcagtt
catgggaagcttaccattgactaccagggtgtggagatatgtcttgagcgaccttggagg
agggaaactatgcacaatcttgtaaaagaatccaccggaattgatttcaatgatttggtc
aatgatgttaaagctgctaaagaaataactcttagggccctagaaatcaaccttgataag
aaagacaaatgttctattgaagcatgcccatctgttggccacctccttaatgaggttttt
gagattgttgtagaaccaaagcttctgcaacctacatttgttttggactatcctattgag
atttctcctctggctaaaccacatagaaggcatgcagggctaacagagagatttgaactt
ttcatctgtggtcgtgagctggcgaatgcattttctgaattgactgatcctatggatcag
agaggacgcttggaagagcaagtgaggctgcataatgagaagagagcagcggctgctatg
gaagcaaatagtgcagaagagcgaggaaataaaaacgaggatgactcatatgaagtgact
cttgatgatgacttcctaacggctctggaatatggaatgcctcctgcttcaggaatggga
cttggaatcgacaggctagtgatgcttctgacaaactctgcaagcattcgagatgtaatt
gcttttccagttcttaagattcagcaatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (36)   

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