KEGG   Juglans regia (English walnut): 109005328
Entry
109005328         CDS       T05245                                 
Name
(RefSeq) RNA-binding protein Y14-like
  KO
K12876  RNA-binding protein 8A
Organism
jre  Juglans regia (English walnut)
Pathway
jre03013  Nucleocytoplasmic transport
jre03015  mRNA surveillance pathway
jre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109005328
  09122 Translation
   03013 Nucleocytoplasmic transport
    109005328
   03015 mRNA surveillance pathway
    109005328
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jre03019]
    109005328
   03041 Spliceosome [BR:jre03041]
    109005328
Messenger RNA biogenesis [BR:jre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     109005328
Spliceosome [BR:jre03041]
 Complex C
  Other components
   EJC/TREX
    109005328
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 109005328
NCBI-ProteinID: XP_018839745
UniProt: A0A2I4G780
Position
5:20496473..20502138
AA seq 210 aa
MASAADVEAVDFEPEDDDLMDEDGGVDTVAADATTSPMAPLPKLKSAITGAASSSAVARK
TKGRGFREDHPEAPDRSTRLAASKFDSLKSPDGPGPQRSIEGWIILVSGIHEEAQEDDLQ
NSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAQTAISSMNGAEFLTQTISVDWAF
SSGSSANGAMKRKNTRPPRERRSRSPRRRY
NT seq 633 nt   +upstreamnt  +downstreamnt
atggcaagcgcagcagatgtggaggctgtggacttcgagccggaggacgacgaccttatg
gacgaggacgggggcgtggacaccgtagcagccgacgccaccacctcgccaatggctcct
cttccgaagctcaagtccgctattactggcgccgcctcctcctctgcggttgccaggaag
accaagggccgtggcttccgcgaggaccatcctgaagcccccgaccgctccacccgcctt
gccgcctccaagttcgactccctcaagtcccccgacggtcctggcccccagcgatccatt
gaaggatggattattctggtcagtggaatacacgaagaggcacaagaggatgatctacaa
aattcttttggtgagtttggagagattaagaatttgcatttaaatcttgatcgccgaacc
gggtttgtcaagggatatgccctaattgagtatgagaactttgaggaagcacaaactgca
atatcctccatgaatggagcagaatttctgacacaaactatcagtgttgactgggccttc
agcagtggatcctcagctaatggagcaatgaaaagaaagaatacaaggccacctcgagaa
cgtcgctcgaggagtccgaggaggagatactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (38)   

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