KEGG   Juglans regia (English walnut): 109005528
Entry
109005528         CDS       T05245                                 
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g18940, chloroplastic-like
  KO
K17710  pentatricopeptide repeat domain-containing protein 1
Organism
jre  Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:jre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:jre03016]
    109005528
   03029 Mitochondrial biogenesis [BR:jre03029]
    109005528
Transfer RNA biogenesis [BR:jre03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    109005528
Mitochondrial biogenesis [BR:jre03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    109005528
SSDB
Motif
Pfam: PPR_2 PPR_3 PPR PPR_1 PPR_long Mtf2 Clathrin TPR_12 TPR_8
Other DBs
NCBI-GeneID: 109005528
NCBI-ProteinID: XP_018840056
UniProt: A0A2I4G824
Position
8:3650977..3654205
AA seq 845 aa
MEGALFHNRPVYPIPTDRPAQPNPPLKFTSTTLPPPPQSPPPASFPVDTLLQHLLHLSSP
PNTIHRLKPIHPTQRSNTRFPAHHISVDSAEAGHELAHPKIITSVSAPQYENNKEEARLE
NGTLEFMSIKCKFMFNSILQQPLTSLNAFFDSVKFELREVDLISLLKALDLSDNRERAFL
LIEWVSMNLSSENVKLDNQVIELMVRILGKESRHLNALKLFDVIPVEEYSLDIRAYTTIL
HAYSRTGKYRKAIAMFEKIKESGLSPTLVTYNVMLDVYGKMGRSWNKILVLLDEMRNKGL
EFDEFTCSTVISACGREGLLKEAREFFAGLKSQGYAPGTVTYNSLLQVFGKAGIFSEALS
ILKEMEDNNCPPDSVTYNELVAAYVRAGFYEEGAAVIDTMTHKGVFPNAVTYTTVINAHG
RAGKEDKALRLFNQMKVLGCVPNVCTYNAVLSMLGKRSRPEEMIKILCDMKLNGCAPNRI
TWNTMLAMCGDKGKHKYLSRILREMKHCGFEPDRDTFNTLISAYGRCGSQVDAAKMSEDM
IEAGFTPCVTTYNAFLNALARRGDYRAAESVILDMRSKGFKPNETSYSLMLHCYAKGGNI
RGIEKIENEIYDGPIYPSWMLLRTLILANFKCRALMGMERAFLELQKNGYKPDLVLFNCM
LSIFAKKNMYDRAHEMLHLIHENGLQPDLVTYNSLMDMYARGGECWKAEEVLKGLQESGG
KPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTARGIRPCIFTYNTFVAGYVGQGMFTEADE
VLGYMIQNNCRPNELTYKIVVDGYCKARKYKEAMDFVSKIKEMDNSFDDQFEQRLATRIR
EFLES
NT seq 2538 nt   +upstreamnt  +downstreamnt
atggaaggtgctctctttcataaccggccggtgtatcccatcccgaccgacagacccgcc
caacctaacccgcctctgaaattcacttcaacaacactgccgccccctcctcaatccccg
cctcctgcctcgttccccgtagacactctccttcagcaccttcttcacctctcttcgcct
cccaacaccatccacaggctcaaacccatacatccaactcagcgcagcaatacccgattc
cccgcccatcacatttcggttgattcggccgaggcagggcacgaactagcccatcccaaa
ataataacttcagtttcagccccacagtatgagaacaacaaagaagaggctcgactagaa
aatggcactcttgaattcatgtcaataaagtgtaagttcatgttcaattcaattttacaa
cagcctttgactagtttgaatgcattctttgattctgtcaagtttgagttgcgtgaagtt
gatttgatcagtctcttgaaagcattagacctttcggacaatcgggagagagcctttttg
ttgattgagtgggtttccatgaacttaagctctgaaaatgtgaaactggataatcaggtt
attgaattaatggttaggattcttgggaaagagtcgcggcatttgaacgcgttgaagttg
tttgatgttattcctgttgaggaatactcgcttgatatccgagcctataccactattctt
catgcatattctcgcactggcaagtacagaaaagcaatcgctatgtttgagaagataaag
gaaagtggtctctcccctactttggtaacttacaacgtgatgcttgatgtttatgggaag
atgggtcgttcttggaataagattttagtcctcttggatgagatgagaaacaaagggctt
gagtttgatgagtttacttgcagtactgtgatatctgcgtgtgggagagagggccttttg
aaagaagcgagagagttctttgctggattgaagtctcaggggtatgcacctggaactgtt
acttataattctctgctacaagtgtttgggaaggcagggatattctcagaggctttgagc
atcttgaaggaaatggaggataataactgcccacctgactctgttacttacaacgagctt
gtagcagcttatgtcagagcgggattctatgaagaaggagcggctgtcattgacacaatg
acgcacaaaggagtatttcccaatgctgttacatataccactgtgataaacgctcatggc
agggcaggaaaggaggacaaggccttaaggctgttcaaccagatgaaggtgttgggttgt
gttcctaatgtatgcacatacaatgctgttctctcaatgctagggaaaagatcgcgacca
gaagagatgataaagatactctgtgatatgaagttaaatggatgtgctccaaaccgtatt
acatggaacacaatgcttgccatgtgtggtgacaagggtaaacacaagtatctctctcgc
atcttacgggaaatgaagcattgtggttttgagccagatagagacacctttaacactttg
atcagtgcatatggccggtgtggctctcaagttgatgctgctaaaatgtctgaggacatg
attgaagcaggttttactccgtgtgttaccacttataatgcttttctaaatgctctggct
cgtagaggtgattatagagctgcagaatctgtcattctagacatgagaagtaagggtttc
aagccaaacgaaacttcatactcactgatgcttcattgttatgcaaagggagggaatatc
agaggcatagagaagattgagaacgaaatttatgatggtcctatttatcctagttggatg
cttttgagaactctcattcttgcaaacttcaagtgtagagcactaatgggaatggagagg
gcatttctggaattgcagaagaatggatataagcctgatttggttttgtttaattgcatg
ctctccattttcgccaaaaaaaacatgtatgacagggcccatgagatgctgcacttgatt
cacgagaatgggctgcagccagatctcgtgacctacaatagcttgatggacatgtacgct
agagggggagagtgctggaaagcagaagaagtccttaagggactacaagaatctggtggg
aaaccagacctcgtgtcttacaacactgtcatcaaaggattttgcagacaagggctcatg
caggaggccataagaactctctcagagatgacggccagagggattcggccctgtatcttt
acatacaatacttttgtggcaggctatgttgggcagggaatgtttacagaagcggatgaa
gtattaggctatatgattcagaataattgcagaccaaatgagctaacttacaagattgta
gtggatggttattgtaaggcgagaaaatacaaagaggccatggattttgtgtcaaagata
aaggagatggataattcttttgacgatcagtttgaacagagacttgctacccgtatcagg
gagtttttggagtcatga

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