KEGG   Juglans regia (English walnut): 109007718
Entry
109007718         CDS       T05245                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42-like
  KO
K12811  ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Organism
jre  Juglans regia (English walnut)
Pathway
jre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109007718
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:jre03041]
    109007718
Spliceosome [BR:jre03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109007718
 Complex B
    109007718
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 109007718
NCBI-ProteinID: XP_018843051
UniProt: A0A2I4GGM9
Position
11:complement(27116175..27121785)
AA seq 1133 aa
MEEGKHKSRREDSERSRDRERDKARNGEKRPREKKNSDSRRSERESSDSDDKYDREREKH
RTRTRDDERERAREKKREREREKEKEKRERAKEKEREREREREKREREREGREREREKEK
EKEKDRERREREREKEKEREERRMQDREKRRAADGDDGNDDDEVREHDRKRRRRDDDDHR
ERDRERSSSRPRKHRDDNEESPRRNSGGDHSDVTEKKLTREEELEDEQRRLDDEIEKRRR
RVQEWQELRRAKEEAEREKGGEANADEPMSSKTWTLEGESDDEEVPGKLETDMDVDEDAR
PTNEQAEASVLVDLGNETDAPTLQNGGDVDAEDDEIDPLDAFMNSMVMPEVEKLKSDLAP
STIDDKNVDLKNKDKKHEGSNSQQPRKGQKHSMGRIMQGEDSESDYDDPENDEDRLDEED
DDEFMKRVKKTKVEKLSLVDHSKIEYQPFRKNFYIEAKEISKMTFEEVAAFRKQLELKLH
GKDVPKPVKTWYQTGLTSKILETIKKLNYEKPMTIQAQALPIIMSGRDCIGIAKTGSGKT
VAFVLPMLRHIKDQPPVEAGDGPIGLIMAPTRELVQQIHSDIKKFAKVLGIRCVPVYGGS
GVAQQISDLKRGTEIVVCTPGRMIDILCTSAGKITNLRRVTYLVMDEADRMFDMGFEPQI
TRIVQNIRPDRQTVLFSATFPRQVEVLARKVLSKPVEIQVGGRSVVNKDITQLVEVRPEN
ERFFRLLEILGEWYEKGKILIFVHSQEKCDALFRDLLRHGYPCLSLHGAKDQTDRESTIF
DFKSNVCNLLIATSIAARGLDVKELELVINFDVTNHYEDYVHRVGRTGRAGRKGCAITFI
SEDDARYAPDLVKALDLSEQAVPDDLKALADSFMAKVNQGLEQAHGTGYGGSGFKFNEEE
DEMRRAAKKAQAKEYGFEEDKSDSEDEDEGIRKAGGDISQQAALAQIIAAASKVSTPMPM
PGSAAQLLPNGGLPISLPGVGLTIPGTAAVVTGTGLPTIANDTAGAARAAAIAAALNLQQ
NLAKIQADAMSEHYEAELEINDFPQNARWKVTHKETLGPISDWTGAAITTRGQYFPTGKV
PGPGERKLYLFIEGPTEQSVKRAKSELKRVLEDITNQALQLPGGAQPGRYQVL
NT seq 3402 nt   +upstreamnt  +downstreamnt
atggaagaggggaaacataagtctaggagagaggattcggaaaggagtcgagatagagaa
agagataaggcgaggaacggggagaagagacctagggagaagaagaacagcgatagtcgg
agatccgagagagagagtagtgattctgatgacaaatatgatagggagagggagaagcat
agaacgcggacacgggatgatgagagggaaagagccagagaaaagaagagggaaagagag
agggagaaggagaaagagaagagggagagggcgaaggagaaagaaagagaaagggaaagg
gagcgagagaagagggaacgtgagagagaggggagggagagggagagggagaaggagaag
gagaaggagaaggatagagaaagaagggagcgtgaaagagagaaggagaaggaaagagag
gagaggagaatgcaagatagggagaagcgacgggcagctgatggcgatgacggcaatgat
gatgatgaggttagggagcatgataggaagcggcgtaggagagatgacgatgatcacagg
gagagagatcgtgaacggagcagcagtaggcctcgcaagcacagggatgacaatgaagag
agcccaaggagaaacagtggtggtgatcactcagatgtgacggagaaaaagctgactcgg
gaagaggagttggaggatgagcagcggagattagatgacgaaattgagaagcggcggagg
agagtacaggagtggcaagagttgaggagagcgaaggaagaagctgagagagaaaaagga
ggggaagcaaatgctgatgaacctatgtctagcaagacctggactcttgaaggggaatct
gatgatgaagaagtaccgggaaaattggagacggacatggacgttgatgaagatgccaga
cctacaaacgaacaagctgaagcatcagtgttggtcgatttgggcaatgaaacggatgca
cccactttgcagaatgggggggatgttgatgctgaggatgatgaaattgatccattggat
gccttcatgaattctatggtgatgcctgaagttgagaagctaaaaagtgatctggctccc
tcaactattgatgataagaatgtggacttgaagaacaaagataagaagcacgaaggaagc
aacagtcaacagccacggaaaggtcaaaaacattctatggggagaataatgcagggcgag
gattcggagtcagattatgatgaccctgagaatgatgaggatcggttagatgaggaagat
gatgatgagttcatgaaaagggtgaagaagacaaaagtggagaagctttctttagttgac
cactccaagatagaatatcaaccgtttcggaaaaatttttacattgaagcaaaagagatc
tcaaagatgacttttgaagaggttgctgccttccggaagcaattggagttgaagttacat
ggtaaggatgtgccgaagccagtcaaaacctggtaccaaaccgggcttacaagtaaaatc
ttggagacaataaagaagcttaactatgaaaagccaatgacaattcaagctcaggctctg
cctataattatgagtggtcgagactgcattggcattgccaaaactggctcaggcaaaact
gttgcgtttgtgctgccaatgttaaggcatataaaggaccagccacccgttgaagctggg
gatggacctattggactaataatggcacctacaagggagcttgtacagcagatccacagt
gacataaagaagtttgcaaaggtacttggtatcaggtgtgtgcctgtgtatggaggttct
ggtgttgcccaacaaattagtgatttgaagcggggcactgagattgttgtctgtactcca
ggcaggatgattgacatactttgcaccagtgccgggaaaattacaaatctgcgtagggtc
acttatttggtcatggatgaagctgatcgaatgtttgacatgggttttgaacctcaaatt
actcgaattgtgcaaaatattcgtccagatcggcaaacagtactcttctctgccactttc
ccgcgccaagttgaagttttggcacgtaaagtgttaagtaagcctgtagagatacaagtt
ggtggtagaagtgttgtgaacaaggacataacacagttggttgaggtgaggccagaaaat
gaaaggttctttagactgttggaaatacttggtgaatggtatgagaaaggaaaaattttg
atatttgtccactcacaggagaagtgtgatgctttgttcagggatctcctcaggcatggt
tatccttgcctctcattacatggggctaaggatcagacagatcgtgagtcgaccattttt
gattttaaaagcaacgtctgcaatttgctgattgcaacaagtattgctgccagggggtta
gacgtgaaggagcttgaattggtgatcaactttgacgttacaaaccactatgaagactat
gtccaccgtgttggtcgtacaggccgagctggtcggaaaggctgtgccattacatttatc
tcagaggacgatgcaagatatgcaccagatcttgtaaaggcattggatctctctgagcaa
gctgttcctgatgacctgaaagctcttgctgatagttttatggcaaaagtgaatcaggga
cttgagcaagcccatgggactggttatggtggaagtggttttaaatttaatgaagaggaa
gatgaaatgaggagagcagcaaagaaagcacaggccaaagaatatggtttcgaggaggat
aagtcagattccgaagacgaagatgaaggtataaggaaggcaggtggtgacatatcacag
caggctgccttagctcagataattgctgctgcctccaaagtcagtacacccatgccaatg
ccaggctcagctgctcaactgcttcccaatggtggacttcctatttcgctgccaggcgtt
ggtctaacaatacctggaacagcagcagttgtgactgggaccggcctgcctactattgcc
aatgacacggctggggcagctcgagcagcagccattgcagctgctctcaacttgcagcaa
aatttggcgaagattcaagctgatgcaatgtctgaacactatgaggcagagctggagata
aatgattttccccagaatgctcgatggaaggttacccacaaggaaactttggggccaatt
tcagactggactggagctgctattaccaccagggggcagtatttcccaacaggtaaggtg
ccaggacctggagaacgcaagctttacttgttcattgagggccctaccgaacagtctgta
aagagagctaaatcagaattaaagcgcgttttggaggacatcacaaaccaggcattacaa
ctgcctggtggagcccaaccagggagataccaagttttataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (89)   
   KEGG ORTHOLOGY (1)   
   RefGene (85)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (3)   
   Pfam (3)   
All databases (105)   

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