KEGG   Juglans regia (English walnut): 109008161
Entry
109008161         CDS       T05245                                 
Name
(RefSeq) DNA excision repair protein ERCC-1-like isoform X2
  KO
K10849  DNA excision repair protein ERCC-1
Organism
jre  Juglans regia (English walnut)
Pathway
jre03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    109008161
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:jre03400]
    109008161
DNA repair and recombination proteins [BR:jre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     109008161
SSDB
Motif
Pfam: Rad10 HHH_2 HHH_5 HHH HRDC
Other DBs
NCBI-GeneID: 109008161
NCBI-ProteinID: XP_018843710
UniProt: A0A2I4GII1
Position
11:1617833..1623146
AA seq 389 aa
MEEEEEQQKSRPNQERKSSIVIKIPSYQEVVESSQSKSTPLSLFNPSQSFSQAFSFIKSS
EFYIPPPPLSSTSSSSFSQPVQASDGTGSRQTTQSDAPSSSSSASAPAATPSLMLSTSLV
TQSRNAILVSHRQKGNPLLRHIRNVRWAFADVVCDYLLGQSSCALYLSLRYHLLHPDYLY
FRIRELQKNFKLRIVLCHVDVEDAVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKI
YENKPADIIQGQMDTDYLSRLNHALTTVRHVNKTNVVTLGTTFGSLSHIMDASMEDLARC
PGIGERKVKRLYDTFHEPFKRVVSSRSTVPDTPIQDNGEPCSTKEKDEDEDKDKENASNH
KKEPEVTVKSALSAAFAKYTDKVGKKNNT
NT seq 1170 nt   +upstreamnt  +downstreamnt
atggaggaagaagaagagcagcaaaagtcacggccaaatcaggagaggaagagctccata
gtgataaagataccatcttatcaggaagttgttgagagctcacagtcgaagtcaacccca
ctctctctcttcaacccctcccagtccttctcccaagccttctccttcatcaaatcctcc
gagttctacatccctcctcctccactctctagcacctcctcctcttccttttcacagccg
gttcaggcctcggatggaaccggttcaaggcaaactactcaatcagatgcaccatcttct
tcctcatcggcttctgctcctgctgctactccttcgttgatgttatcaacgtcacttgtc
acacagagtcgcaatgctattcttgtgagccacagacagaaaggaaatcccttgctcaga
catatcaggaatgtgaggtgggcttttgcggatgttgtctgtgactacttgcttggtcag
agctcatgtgctctctatctgagtcttaggtatcatctgctgcacccagactacttgtat
ttccgtatcagagaactgcaaaagaatttcaagcttcgcattgttctatgtcatgttgat
gtggaagatgcagtcaagcctttacttgaagttactaagacagctctacttcatgattgt
accctattatgtgcttggagcttggaggaatgtggacgctacttggagacgataaaaatc
tatgaaaacaagcctgcagacattattcaaggccaaatggatacagactatctttcacgg
ctaaatcatgctctgacaacggttcgacatgttaacaagaccaatgtagtcacccttggt
actacatttgggtccctttcacatataatggatgcatccatggaagatctagcccgatgc
cctggaataggagagcgcaaggtaaaacgtttgtatgacacttttcatgagccattcaaa
cgggtggtttccagccgttctactgtcccagatactcctatccaagacaatggtgaacct
tgctctaccaaagaaaaagacgaggacgaggacaaggacaaagaaaatgcaagcaaccat
aagaaagagcctgaagtgacagttaaatcagccctgtctgctgcttttgccaagtatacc
gataaagttggtaaaaagaacaacacctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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