KEGG   Juglans regia (English walnut): 109009037
Entry
109009037         CDS       T05245                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 8-like
  KO
K12614  ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
Organism
jre  Juglans regia (English walnut)
Pathway
jre03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109009037
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jre03019]
    109009037
   03036 Chromosome and associated proteins [BR:jre03036]
    109009037
Enzymes [BR:jre01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     109009037
Messenger RNA biogenesis [BR:jre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109009037
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     109009037
Chromosome and associated proteins [BR:jre03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    109009037
SSDB
Motif
Pfam: DEAD Helicase_C ResIII TFIIA CMS1
Other DBs
NCBI-GeneID: 109009037
NCBI-ProteinID: XP_018844913
UniProt: A0A2I4GLZ1
Position
12:4273060..4283584
AA seq 500 aa
MNNNRGRYPPGIGAGRGGGGGGGMNLNPAFQSRVPQQQYVQRGFMQQQNHHHQQQYHHQQ
QQQQQQQQQWLRRAQLGGSDSIVDEVEKTVQSEAADSSSQDWKARLKIPPSDTRYRTEDV
TATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAF
CIPALEKIDQDNNAIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMR
LYQPVHLLVGTPGRILDLAKKGVCILKDCSVLVMDEADKLLSPEFQPSIEQLIRFMPANR
QILMFSATFPVTVKDFKERYLQRPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFSK
LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT
DLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQ
ELGTEIKQIPPHIDQAIYCR
NT seq 1503 nt   +upstreamnt  +downstreamnt
atgaacaacaatagaggaaggtatccgccagggatcggcgcaggccgaggtggaggcgga
ggcggaggcatgaatctaaacccggccttccagtcgagggtcccgcaacaacagtacgta
cagagaggctttatgcagcagcagaaccatcaccaccaacaacagtatcatcatcagcag
cagcaacaacaacaacaacaacaacagtggcttaggagggcccagttgggtggttccgat
tcaatcgtcgacgaggttgagaagactgtgcagtccgaggccgccgactcaagttcgcaa
gattggaaggcaaggctaaagataccgccatctgatacacgctatagaactgaggatgtg
acagcaactaagggaaatgaatttgaggactactttctgaagcgtgagttgctcatggga
atatatgaaaaggggtttgaaagaccatctcccattcaggaagaaagtatcccaattgct
ttaacagggagtgatattcttgctagagcaaaaaatggaactgggaaaacggctgcattt
tgcattcctgcattggaaaaaattgatcaggataacaatgctattcaagttgttatactt
gttccaactcgagagttggctcttcaaacatcacaagtgtgtaaagaacttgggaagcat
ttgaatatccaagttatggtaacaacaggtggtaccagcttaaaggatgatatcatgcgt
ttatatcaaccagttcatttactggttggaactcctggaagaatcctagatcttgcaaaa
aaaggtgtttgcattttgaaagattgttctgtgcttgttatggatgaggctgataagctt
ctttctccggaatttcaaccatcaatagagcagctaattcgatttatgcctgcaaaccgt
caaattttgatgttttcagcgacatttcctgttacagtcaaagacttcaaagaaagatat
cttcaaaggccatatattattaaccttatggatgagcttacgctcaagggtatcacacaa
ttctatgctttcgttgaagaaagacagaaagtccactgcctaaatactcttttctccaag
ctgcaaataaaccaatcaattatattctgcaattctgtgaatcgggttgagctgttggcg
aagaaaattacagaacttggttattcttgtttttacattcatgcaaagatgctgcaagac
catcgtaacagagtctttcatgacttccgcaatggtgcatgcaggaatcttgtttgcact
gatctatttacaaggggaatcgacattcaagcggtcaatgtcgttattaactttgatttt
cccaagaactcagaaacatatctgcacagggttggacgatctggaaggtttgggcacctt
ggtttagccgtgaatttgatcacctatgaggaccgctttaacttgtataggattgagcaa
gaactcgggactgagataaagcaaattccaccacatattgatcaggcaatttactgtcgg
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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