KEGG   Juglans regia (English walnut): 109009056
Entry
109009056         CDS       T05245                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
jre  Juglans regia (English walnut)
Pathway
jre03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    109009056
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:jre01009]
    109009056
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jre03019]
    109009056
   03036 Chromosome and associated proteins [BR:jre03036]
    109009056
Protein phosphatases and associated proteins [BR:jre01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     109009056
Messenger RNA biogenesis [BR:jre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     109009056
Chromosome and associated proteins [BR:jre03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     109009056
SSDB
Motif
Pfam: WD40 ComGF
Other DBs
NCBI-GeneID: 109009056
NCBI-ProteinID: XP_018844941
UniProt: A0A2I4GM14
Position
6:5025679..5034494
AA seq 513 aa
MLGGGEGTAAGAPQQLEWKFSQVFGERAAGEEVQEVDIISAIEFDRTGNHLATGDRGGRV
VLFERNDTKDHGGNRMDLERMDYSIGRHPEFHYKTEFQSHEPEFDYLKSLEIEEKINKIR
WCQTANGALFLLSTNDKTIKFWKVQEKKVKKVCDLNVDLSGAIGNGPVVCSSTSTSSKPC
MENGGCNENPFSYSSINTSLPAGGVLSLRLPVVANNNETNLVAKCRRIYAHAHDYHINSI
SNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLA
YSSSRGSIRLIDMRQSALCDTHSKLFEEQEVPGTRSFFTEIIASISDIKFAKDGRYILSR
DYMTLKLWDVNMDSGPVVTFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGIRVATGSYS
NMFRVFGCSGGSTEATLEASKNPMRRQIQTPSRPSKSLGTLPRILRRGGADSSGVDVNGS
SFDFTTKLLHLAWHPTENSLACAASNSLYMYYA
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgctcggcggaggagagggaacggcggcgggggcgccccagcagctggagtggaaattc
tcgcaggttttcggcgaacgggcggccggggaagaagttcaggaagttgatatcatttct
gcaattgaatttgatagaactgggaaccacttagctaccggagatcgtggggggcgggtg
gttttatttgagagaaatgatacaaaggatcatggtggaaatcgcatggatctagagagg
atggattattcaatcggtaggcatcctgagttccactataaaactgagtttcagagccat
gaacctgagtttgactatcttaagagcttggaaattgaggagaaaatcaacaagatcaga
tggtgccagacagctaacggtgctctgtttcttctctccaccaatgataaaacgataaaa
ttttggaaggtccaagagaagaaggtcaagaaagtatgtgacttgaacgtagatctttcg
ggagctataggaaatggcccggttgtttgttcaagtacatcaacaagctccaaaccgtgc
atggagaatggaggatgtaatgaaaaccccttcagttattcaagcatcaatacttcactc
ccagctgggggtgtcctgtccttgcgtctgcctgtggtagcgaacaataatgagacaaac
cttgtggctaaatgtcgaagaatctatgcccatgcacatgactatcatatcaattctatt
tcaaataacagtgatggtgaaacttttatctcagcggatgatttgcgaataaacctttgg
aacttagaaattagcaatcaaagtttcaatatcgttgatgtgaagcctgcaaatatggaa
gatctgaccgaggtgataacgtcagcagagtttcaccctactcactgtaatatgttagca
tacagtagctctaggggctcgatccgtcttattgatatgcggcagtcagctctgtgtgat
actcatagcaaattgtttgaagaacaggaagtgcctggtacaaggtcttttttcaccgag
ataattgcatcaatttcagatattaagttcgcaaaagatggaagatatatccttagtcga
gactacatgactcttaagctgtgggacgtaaatatggatagcggcccagttgtaactttt
caggttcatgaatatttaagacctaagctgtgtgatttatatgaaaatgattctatcttc
gacaaatttgagtgctgtctaagtggagatggaattcgtgttgcaacaggttcctacagc
aatatgtttcgcgtgtttggttgttctggagggagcactgaagcaacattggaggctagc
aaaaaccctatgaggagacaaattcaaacaccatcaaggccttctaaatctctgggcact
cttccccgcattctcaggcgaggaggagctgactcctctggagttgacgtgaatggaagt
tcatttgatttcactacaaagttgctacacctagcatggcacccgactgagaactcgctt
gcctgtgctgcttcaaatagcctttacatgtattatgcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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