KEGG   Juglans regia (English walnut): 109010780
Entry
109010780         CDS       T05245                                 
Name
(RefSeq) nuclear poly(A) polymerase 3
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
jre  Juglans regia (English walnut)
Pathway
jre03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    109010780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jre03019]
    109010780
Enzymes [BR:jre01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     109010780
Messenger RNA biogenesis [BR:jre03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     109010780
SSDB
Motif
Pfam: PAP_NTPase PAP_central NTP_transf_2 PAP_RNA-bind
Other DBs
NCBI-GeneID: 109010780
NCBI-ProteinID: XP_018847238
UniProt: A0A2I4GTL9
Position
7:complement(16869940..16879776)
AA seq 493 aa
MDEERSISLVQFIVNEGLVPSPDEEEKRKNVILKLKEIVLTWIKKVAWQRRFPKEQIAAT
CATILTYGSYGLGVHGSESDIDALCVGPLFATMAEDFFIVLHNMLKSRPEVSEIHCVKDA
KVPLIRFEFDGISIDLPYAQLKVSSVPENVDVLNPYFLRDVNETSWKSLSGVRANKRILQ
LVPNLENFQSMLRCVKLWAKRRGVYGNLLGFLGGVHLAILAASVCQKYPNASLNSLIMNF
FQTFAFWPWPTPVILQDRILPTAGDAIETRSLMPIQLPCSPYEYCHSNVTRSTFRRIRAE
FLRGHYRTRDLLKPDFDWGSVFEHFPYPKEYTRFVKIYLSASDQDDLGDWVGWVKSRFLS
LLVKLEEVQGLCDPNPIEHVDIDVTEPNVVFYWGLNPSKSSFTDIRHVEEDFMKNLKNGY
QGSAGGMGLSILQASQLPKSALLDTGIGKGTKACWKILDYNLRRTPTYSQHLPHYFVGYV
ATDREPEYPSAGG
NT seq 1482 nt   +upstreamnt  +downstreamnt
atggacgaggaaaggtcaatctctctggttcagttcatagttaatgaaggactcgtgccg
tctccggacgaggaagagaagaggaaaaatgtcattttgaagctcaaagagatagttttg
acatggattaagaaggttgcatggcaacgtcgttttccaaaagagcaaattgctgctacc
tgtgccactattttgacttatggatcatatggcctcggagttcatggttcagaatccgac
attgatgctttatgtgttggccctttgtttgcaaccatggcagaggacttttttattgtt
ctgcacaacatgcttaaaagcagacctgaagtatcagagatccactgtgtaaaggatgca
aaagttcctctaattcggtttgaatttgatgggatctcaattgatctcccatatgcgcag
cttaaggtgtcatctgttcctgaaaatgtggatgtattaaacccatacttcctaagggat
gtcaatgaaactagctggaagagcttgtctggtgtacgtgctaacaaacgcattcttcag
cttgttccaaacttggagaatttccaatcaatgctgcgatgtgttaaattatgggctaaa
aggcgaggagtatatggtaatttacttggctttctgggaggagttcatctagcaattctt
gcagcttctgtttgtcaaaagtatccaaatgctagcttaaattctcttattatgaacttc
ttccagacgtttgcattttggccgtggcctactcccgttatattgcaagatagaatattg
cctacagccggagatgccattgagacacgatccttaatgcctattcagctgccgtgtagt
ccatatgaatattgccattccaatgtcactagaagcacattccgcaggatcagggcagag
tttctccgaggtcattataggactagggatcttttgaagccagattttgattggggtagc
gtatttgagcatttcccatatccaaaggagtatacacgatttgtcaaaatttacctctcg
gcttctgaccaagatgatctaggagattgggtaggttgggtgaaatcacgttttctctct
cttcttgtcaagttggaggaggtacaaggtctttgtgaccctaaccctattgaacatgta
gatattgatgtaacagagcccaatgtcgtgttctactggggcttaaatcccagcaagagt
agtttcacagatatacggcatgttgaagaggatttcatgaagaatctcaaaaatggctat
caagggtctgctggagggatgggattatccattttgcaagcttcgcagctgcctaagagt
gctcttcttgacactggaatagggaaggggacgaaagcatgttggaaaattctcgattac
aatcttcgaagaaccccaacgtactctcagcatttgccacattactttgttgggtatgtg
gcaaccgacagagagcccgagtacccaagtgctgggggttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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