KEGG   Juglans regia (English walnut): 109022313
Entry
109022313         CDS       T05245                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 9-like
  KO
K03133  transcription initiation factor TFIID subunit 9B
Organism
jre  Juglans regia (English walnut)
Pathway
jre03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    109022313
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:jre03021]
    109022313
   03036 Chromosome and associated proteins [BR:jre03036]
    109022313
Transcription machinery [BR:jre03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     109022313
   Coactivators
    SAGA/TFTC/STAGA complex
     109022313
Chromosome and associated proteins [BR:jre03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     109022313
    STAGA complex
     109022313
    TFTC complex
     109022313
    SAGA complex
     109022313
    SLIK complex
     109022313
SSDB
Motif
Pfam: TFIID-31kDa CENP-S Bromo_TP CENP-T_C LonB_AAA-LID Histone
Other DBs
NCBI-GeneID: 109022313
NCBI-ProteinID: XP_018860731
UniProt: A0A2I4HX27
Position
12:25996229..25998684
AA seq 174 aa
MAEGDEDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKA
AIDTGDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPGTIAGAGIPLPPEQDTLIS
PNYQLAIPKKQPSPTVEETEEDEELVDPKPSQEQRTDMPQHTQRVSFPLMNRPK
NT seq 525 nt   +upstreamnt  +downstreamnt
atggctgagggagatgaggatttgccaagggatgcaaagattgtgaagtcactgctgaaa
tcaatgggtgtcgaggactatgaaccccgtgttatacaccaatttttagaactgtggtat
cgatatgttgtcgatgtattaactgatgcacaggtgtactcagagcatgctggtaaggct
gccatagacactggtgatgtcaagcttgctatccagtcaaaagtcaattttagcttctct
caaccaccaccaagagaggtcttactggagctggctcgaaaccggaacaaaataccattg
ccggggacaatagctggggctggtattcctctcccacctgagcaggatacgctgatcagc
cccaactaccaacttgcaatcccaaagaagcaaccttccccaacagttgaagaaaccgag
gaggatgaagagcttgttgatcccaaaccctcgcaagaacagaggacagatatgccacag
catactcaaagggtctcctttcccctcatgaaccgtccaaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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