KEGG   Janthinobacterium svalbardensis: CNX70_20920
Entry
CNX70_20920       CDS       T05119                                 
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
jsv  Janthinobacterium svalbardensis
Pathway
jsv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:jsv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CNX70_20920 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jsv03019]
    CNX70_20920 (pnp)
   03016 Transfer RNA biogenesis [BR:jsv03016]
    CNX70_20920 (pnp)
Enzymes [BR:jsv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     CNX70_20920 (pnp)
Messenger RNA biogenesis [BR:jsv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     CNX70_20920 (pnp)
Transfer RNA biogenesis [BR:jsv03016]
 Prokaryotic type
  tRNA degradation factors
   CNX70_20920 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase S1 KH_1 KH_2 DUF5813 KhpA-B_KH PCB_OB
Other DBs
NCBI-ProteinID: ATD62331
UniProt: A0A290WZM6
Position
complement(4722837..4724954)
AA seq 705 aa
MFNKVTKTFQYGQHQVTLETGEIARQASGAVLVSIEDTVVLATVVARKDAKPGQDFFPLT
VDYVEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGYLNEVQVIIHVLSV
NPEIDPDIAAMIGASAALCVSGVPFSGPIGAARVGYANGQYILNPTVQQLKTSEMDLVVA
GTETAVLMVESEAKQLSEEIMLGAVVFGHDQMKVVIDAIHDLVRDGGKPEVEWAPAPKNE
ALIARVAHFANAKINDAYQTKDKQERTAKLKAATSEVIADLSAEAAANGGASIDSAEVNN
ILFDIEAKIVRTQILDGEPRIDGRDTRTVRPISIRTSVLPRTHGSALFTRGETQALVVAT
LGTARDSQKIDALMGEFTDSFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALIAAL
PAAEEFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMKEHVAGIAMGLIKEGGKF
AVLSDILGDEDHLGDMDFKVAGTRNGITALQMDIKIMGITKEIMQVALAQAKEGREHILG
EMQKAMPHVKTELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVV
TIASVDAAAGQEAKRRIEELTASVEVGKTYEGTVLKLLDFGAIVQVMPGKDGLLHISQIA
NERVNAVADYLKEGQLVRVKVLETDDRGRLKLSMKAAEGNEAPAA
NT seq 2118 nt   +upstreamnt  +downstreamnt
atgtttaacaaagttacgaaaaccttccagtacggtcaacaccaagtgaccctggaaacc
ggcgaaatcgcacgtcaggcatccggcgcagtgctggtgtcgatcgaagataccgtcgtt
ctggcaacggtagtggcacgcaaagatgccaaaccaggccaggatttcttccctttgacg
gtagattatgttgaaaaaacctatgctgccggtaaaatcccgggcggttttttcaagcgc
gaaggccgtccttccgaaaaagaaacactgacatcccgtctgatcgaccgtcctatccgt
ccgctgttcccggaaggctacctgaatgaagtgcaagtcatcattcacgtgttgtcggtc
aaccctgaaatcgatccggacatcgccgccatgatcggcgcctcggctgccctgtgcgta
tcgggcgtgcctttcagcggcccgatcggcgctgcgcgcgtcggttacgcgaatggccag
tacatcctgaacccgaccgtccagcaactgaaaacgtcggaaatggacctggtggtcgcc
ggtaccgaaacggccgtgctgatggtcgaatcggaagcgaaacagctgtccgaagaaatc
atgctgggcgccgtggtctttggccacgaccagatgaaagtcgtcatcgacgcgattcat
gacctggtgcgtgacggcggcaagccggaagtggaatgggcgcctgcgccgaaaaacgaa
gctctgatcgctcgcgtcgcacatttcgccaacgccaagatcaatgacgcgtatcaaacc
aaggacaagcaagagcgtacggccaagctgaaagcagcgacgtcggaagtgatcgccgat
ctgtcggctgaagctgccgccaacggcggcgcgtcgatcgacagcgctgaagtgaacaac
atcctgttcgacatcgaagcgaaaatcgtgcgtacgcaaatcctcgacggcgagccacgc
atcgacggccgcgacacgcgcaccgtgcgtccgatctcgatccgcaccagcgtgctgcca
cgcacccacggttcggccctgttcacgcgcggcgaaacgcaagcgctggtcgtcgctacc
ctgggcaccgcccgcgacagccagaagatcgatgcgctgatgggcgagttcaccgattcg
ttcatgctgcattacaacatgcctccgttcgccacgggcgaaacgggccgtgtcggtacg
cctaaacgccgcgaaatcggccacggccgtctggccaagcgcgcgctgatcgccgccctg
ccagcagctgaagagttcagctactcggtgcgcctggtatcggaaatcacggaatcgaac
ggttcttcgtcgatggcttcggtgtgcggcggctgcctggcactgatggacgccggcgtg
ccgatgaaagaacacgtggccggtatcgccatgggcctgatcaaggaaggcggcaagttt
gccgtgctgtccgacatcctgggcgacgaagatcacctgggcgacatggacttcaaggta
gccggtacccgcaacggtatcacggcgctgcagatggacatcaagatcatgggcatcacc
aaggaaatcatgcaagtggcactggcgcaagccaaggaaggccgcgagcacatcctgggc
gaaatgcaaaaagccatgccgcacgtcaaaaccgaactgtccgatttcgcaccgcgtctg
atcaccatcaagatcaacccggaaaaaatccgtgacgtgatcggcaagggcggcgccgtg
attcgcgcgctgaccgaagagacgggcacccagatcgacatcagcgacgaaggcgtggtc
accatcgcttccgtcgacgctgctgccggccaggaagccaagcgccgcatcgaagaactg
accgcttccgtcgaagtgggcaagacctacgaaggcaccgtgctgaaactgctggacttc
ggcgccatcgtgcaagtcatgccaggcaaagacggcttgctgcacatcagccagatcgcc
aacgagcgcgtcaacgcggtcgccgattacctgaaagaaggccagctggtccgcgtcaaa
gtgctggaaacggatgaccgtggtcgtctgaagctgtcgatgaaagctgctgaaggcaac
gaagcgccagccgcttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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