KEGG   Kazachstania africana: KAFR_0F04290
Entry
KAFR_0F04290      CDS       T02487                                 
Symbol
KAFR0F04290
Name
(RefSeq) hypothetical protein
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
kaf  Kazachstania africana
Pathway
kaf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kaf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KAFR_0F04290 (KAFR0F04290)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kaf03019]
    KAFR_0F04290 (KAFR0F04290)
Messenger RNA biogenesis [BR:kaf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     KAFR_0F04290 (KAFR0F04290)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     KAFR_0F04290 (KAFR0F04290)
SSDB
Motif
Pfam: PAT1 PIN-TPR-GreABC
Other DBs
NCBI-GeneID: 13884491
NCBI-ProteinID: XP_003958159
UniProt: H2AXC4
Position
6:841786..844350
AA seq 854 aa
MSFFGFDASLPNSEKVNSKKKKPLDFDETYKGLGDYELEENDYLNNETFGANVELGTDFD
FGHGDSTPVSNPDVPHRSYVAAASTGMNVPQENLDTTIDLKPMESLWGGSGHNNQQVMQQ
PIQPAEPQILSMEEIERQQRQLQMNPSMQQQGGYVMPPPGFMQQQGPPGNMNNQFPNQFP
PQFVPPGMPNQPQFQQIPQDFHQQMYQPPNQQFHPQQMNVPPFQHPQAIEQQQQQQPRPN
IQSPQEIQPNQAIQQQPNEAMKSPSVEQEAMKSSVQQQHLQSRLSPQQHRPRTSSMSRQQ
HQQQRREPPSAEEQKRLQIRHAKVEKILKHSGLMTPRDKDFITRYQLSQIVTEDPYNEDF
YFQVYKIIQRGGVVGESNKGLIARAYLEHSGHRLGGRYKRADIALQRMQSQVEKAVTVAK
ERPHKNALEINDLDKNSEHGRDGVLGKISSTLNSKAPRRQLQIPLKSANSNDNSTSSLGS
PIQGNNMMNAATSGALEEVTESLGNVDINAKSRVRRRSSYAFTSVDQNSVLSRSGGRKFV
LRLIETVYGEVLELEANLRSGKKIDNNKLWDALHIDDEAYEVCPFVSMLSFDKGVKIMPR
IFNFLNKEQKLKLLQIFFSELSHLNIIIISSYKTNPTPSESQLKQIDLFQTVFLKIIVSF
LSNNSNFIEIMGLLLHLIKNNNVSFISTSKIGLNLITVLISRAALIRQDSNRSNILSSPE
ISTWNEIYDKLFTSLESKLSLIFPPKEYTNKIISITNDPQFLQDDTELNLCYYDQAYIWQ
FLASLALSGKLNHQRIIIDEVRDEIFGTITLAESLKSVNSNDSTYRREKLYQDLNLFLNV
MGLVSRDGEITELK
NT seq 2565 nt   +upstreamnt  +downstreamnt
atgtccttttttggttttgacgcatctttgccaaacagtgaaaaggtcaattcaaaaaaa
aaaaagcctttagattttgatgaaacttataaaggtttaggtgattatgaacttgaagaa
aatgattatttgaataatgagacctttggtgccaatgtagaattaggtacggacttcgat
tttggtcatggtgattcaacccctgtttctaatccagacgttccacatagatcttatgtc
gctgctgcatctactggtatgaatgttccacaggaaaatttagacaccactatagatttg
aaaccaatggaatcattatggggtggtagcggtcacaataatcaacaagtaatgcaacaa
ccaattcaaccagcggagcctcaaattttatcaatggaagaaattgaaagacaacaacgt
caattacaaatgaacccttcaatgcaacaacaaggcggttacgtaatgcctccaccgggt
tttatgcaacaacaaggccccccaggaaacatgaacaaccagttccccaaccaattccca
cctcaatttgttccacctggaatgccaaatcaacctcaattccaacaaatccctcaagat
ttccaccaacaaatgtaccaaccaccaaaccaacaattccatccacagcagatgaatgtg
ccaccatttcaacatcctcaagcaattgaacaacaacagcaacaacaacctcgcccaaat
attcaatcaccacaggagattcaaccaaatcaagctatccagcaacaaccaaatgaagct
atgaaatctccatctgttgaacaagaagctatgaaatcatctgttcaacaacaacattta
caatctcgtctatctccacaacaacatcgtcctcgcactagctcaatgtctagacaacaa
caccaacaacaaagaagagaaccaccatctgcggaagaacaaaaaagattgcaaattcgt
catgctaaggttgaaaaaattttgaagcattctggcttgatgactcctcgtgataaagat
ttcattacacgttatcaattatcccaaattgttacagaagatccatacaatgaggatttt
tactttcaagtttacaagattatccaacgtggtggtgttgttggtgaatctaataaaggc
ttgattgcacgtgcctatttggagcattctggtcacagacttggtgggagatacaaacgt
gctgacatagctttacaaagaatgcaaagtcaagttgaaaaagctgttacggttgctaaa
gagagaccacacaaaaatgctcttgaaattaatgatctagataaaaattcagaacatggt
cgtgatggtgttttaggtaaaatctcttctactttgaatagtaaggcaccacgtagacaa
ttgcagattcctttaaaatctgctaattctaatgataactcaacttcttctcttggttct
ccaattcaaggaaataacatgatgaatgctgcaacttctggtgccttggaagaagttact
gaatccttaggtaatgtggacatcaacgcaaagtccagagtaagaagaagatcttcttat
gcatttacttctgtggatcaaaactctgttctttctagatcgggtggtagaaagtttgtg
ttaagattaatcgaaactgtttatggagaagttttagaacttgaagccaatctaagaagt
ggtaagaagattgataataataaattatgggatgctttacatattgacgatgaggcttac
gaagtttgtccatttgtgtcaatgctatctttcgataaaggtgtcaaaattatgccaaga
attttcaatttcttaaacaaggagcaaaaattgaaattattgcagattttcttttcagaa
ttatcacatctgaatattatcattatcagttcttacaagactaacccaacaccttctgaa
tcacaattgaagcaaattgatttattccaaaccgttttcttaaagattatcgtttcattt
ttatcaaataattcgaactttattgaaatcatgggtttgttattgcatctaataaagaat
aataatgtttcattcatttctacgtcaaaaattggtttgaatttaattaccgtattaata
tctcgtgcagctcttattagacaggattctaatagaagtaatattttatcatctcctgaa
atctctacgtggaatgaaatttatgataaattgtttacttcattggaaagcaaattatca
ttgattttcccaccaaaggaatatactaataagataattagcattaccaacgatccgcaa
tttttacaagatgataccgaattgaatctatgttattatgatcaggcctacatatggcaa
ttcttggcttcattggctttaagtggtaaactaaatcatcaacgtatcataattgatgaa
gtcagggatgaaatctttggtacaataactttagcagaaagtttaaagagtgtcaacagt
aacgactcaacatatagacgtgaaaagctttatcaagatttgaatttgttcttgaacgtt
atgggattagtctctagagatggcgagatcactgaattgaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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