KEGG   Kutzneria albida: KALB_539
Entry
KALB_539          CDS       T03039                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
kal  Kutzneria albida
Pathway
kal03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:kal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    KALB_539
  09124 Replication and repair
   03420 Nucleotide excision repair
    KALB_539
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kal03021]
    KALB_539
   03400 DNA repair and recombination proteins [BR:kal03400]
    KALB_539
Enzymes [BR:kal01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KALB_539
Transcription machinery [BR:kal03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     KALB_539
DNA repair and recombination proteins [BR:kal03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     KALB_539
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom
Other DBs
NCBI-ProteinID: AHH93915
UniProt: W5VZK1
Position
complement(559565..561226)
AA seq 553 aa
MTDGPLIVQSDKTLLLEVDHPLAEETRTSIAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDALVRYSRYPVPQPLLVDVVDTMARFGRLQLVNHPAHGLTMLSLDRAVLEEVL
RNKKISPMLGERVDPDTVVVHPSERGRLKQALLKVGWPAEDLAGYVDGEAHPISLAEDGW
QLREYQRLAAQAFWAGGSGVVVLPCGAGKTLVGAAAMAQAQATTLILVTNTVSGRQWKRE
LVARTSLTEDEIGEYSGERKEIRPVTIATYQVITRKTKGEYRHLELFDSRDWGLVVYDEV
HLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDVPWRDIEAQGWIAP
ADCVEVRVTLTDNERLTYATAEPEERYKICSTANTKIPVVRAVLDRHKGEPTLVIGAYLD
QLEELGAALDAPVIQGSTKNKEREELFDAFRRGELRTLVVSKVANFSIDLPEASVAVQVS
GTFGSRQEEAQRLGRLLRPKGDGRQAHFYSIVSRDTLDTDYAAHRQRFLAEQGYAYKIVD
ADDLLGPALPEVD
NT seq 1662 nt   +upstreamnt  +downstreamnt
gtgaccgacggccccctgatcgtccagtcggacaagaccctgctgctggaggtcgaccac
cccctcgccgaggagacgcgtacctcgatcgcgccgttcgccgaactggagcgcgccccc
gagcacgtgcacacctaccggatcaccccgctggcgctgtggaacgcgcgcgccgcgggc
cacgacgccgagcaggtggtggacgcactggtgcgctactcgcgctacccggtgccgcag
ccgctgctggtggacgtggtcgacaccatggcccggttcggccggttgcagctggtcaac
caccccgcgcacggcctgaccatgctgtcgctggaccgcgcggtgctggaggaggtgctg
cgcaacaagaagatcagcccgatgctgggcgagcgggtggaccccgacacggtggtcgtg
caccccagtgagcgcggcaggctcaagcaggcgctgctcaaggtgggctggcccgccgag
gacctggccgggtacgtggacggcgaggcgcacccgatctcgctggccgaggacggctgg
cagctgcgcgagtaccagcggctggccgcccaggcgttctgggcgggcggctccggggtg
gtcgtgctgccctgcggtgcgggcaagaccctggtcggcgcggccgccatggcgcaggcc
caggccaccacgctgatcctggtcaccaacacggtgtcgggcaggcagtggaagcgcgag
ctggtcgcgcgcacctcactgaccgaggacgagatcggcgagtactccggggagcgcaag
gagatccgcccggtcaccatcgccacgtaccaggtgatcacccgcaagaccaagggcgag
taccggcacctggagctgttcgactcccgcgactggggactggtcgtctacgacgaggtg
cacctgctgcccgccccggtgttccggatgaccgccgacctgcagtcacgcaggcggctg
gggctgaccgccaccctggtgcgcgaggacggccgcgagggtgacgtgttctcgctgatc
ggtcccaagcgctacgacgtgccctggcgcgacatcgaggcacagggctggatcgcgccc
gcggactgcgtggaggtgcgggtgacgctgaccgacaacgagcggctcacctacgccacc
gccgagcccgaggagcggtacaagatctgttccacggcgaacacgaagatcccggtggtg
cgggccgtgctggaccggcacaagggcgagccgaccctggtcatcggcgcgtacctggac
cagctggaggagttgggcgccgcgctggacgcgccggtgatccagggctccaccaagaac
aaggagcgcgaggagctgttcgacgcgttccgccggggcgagctgcgcacactggtcgtg
tccaaggtggcgaacttctccatcgacctgcccgaggcctcggtcgcggtgcaggtgtcg
ggcaccttcgggtcccggcaggaggaggcgcagcggctgggcaggctgctgcggcccaag
ggcgacggccggcaggcgcacttctactcgatcgtctcccgcgacaccctggacaccgac
tacgccgcgcaccggcaacgcttcctcgccgagcagggctacgcgtacaagatcgtcgat
gcggacgacctgctgggcccggcactgccggaggtggactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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