KEGG   Kitasatospora aureofaciens: B6264_07045
Entry
B6264_07045       CDS       T05021                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
kau  Kitasatospora aureofaciens
Pathway
kau03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kau00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B6264_07045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kau03021]
    B6264_07045
   03019 Messenger RNA biogenesis [BR:kau03019]
    B6264_07045
Transcription machinery [BR:kau03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     B6264_07045
Messenger RNA biogenesis [BR:kau03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     B6264_07045
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 NACHT AAA AAA_22 Spore_III_AA
Other DBs
NCBI-ProteinID: ARF78705
Position
complement(1655109..1657202)
AA seq 697 aa
MSDSTDLMGARPDAEASDAAAAPAAPRRRRNAAAGLDGMVLAELQKLAADLGITGTGRMR
KSQLIETIKEKSGGDPLLAAGGAPAAKRTAAKAEAEAPAEKPARRSKAAAAAAAPAAEAQ
AQIEIPVQAAAETAAAPARAERTRRRATSAAGAPTAPAAEAGAEAATVAVAEPKQAERPA
ETRGFEGREEGRETRRDRRERRDRRESGERTERTERQDGAEAQAGQDGEGRESRRDRRNR
RERADRQGGQQGQQQGQGDGQQRREGGQQVQQPQAQQGGYDDDEFGEGRRGRRGRYRDRR
GRRGREGFETGAVEPQIGEDDVLIPVAGILDILDNYAFVRTSGYLPGQNDVYVSLAQVRK
NGLRKGDAITGAVRQPREGERREKFNAMVRLDSVNGMDPETGRGRPEFNKLTPLYPQERL
RLETDPGVLTTRIIDLVSPIGKGQRGLIVAPPKTGKTMVLQAVANAITHNNPECHLMVVL
VDERPEEVTDMQRSVKGEVISSTFDRPAEDHTTVAELAIERAKRLVELGHDVVILLDSIT
RLGRAYNLAAPASGRILSGGVDSTALYPPKKFFGAARNIENGGSLTILATALVETGSRMD
EVIFEEFKGTGNMELKLDRKLSDKRIFPAVDVDASSTRKEEILLGSEELAIVWKLRRVLH
ALDSQQAIELLLDKMKQTKSNAEFLVQIAKTTPGSGD
NT seq 2094 nt   +upstreamnt  +downstreamnt
gtgagcgactccaccgatctgatgggcgcgcgcccggacgccgaagcgtcggacgcggcc
gccgcccccgccgccccgcgccgccgccgcaatgccgccgcgggcctggacggcatggtt
ctcgccgagctgcagaagctcgccgcggacctgggcatcaccggtaccgggcgcatgcgc
aagagccagctgatcgagaccatcaaggagaagagcggcggggacccgctgctcgccgcc
ggtggcgccccggccgccaagcgcaccgccgccaaggcggaggccgaggccccggccgag
aagccggcccgccgcagcaaggccgccgccgctgccgcggccccggccgccgaggcgcag
gcccagatcgagatcccggtccaggccgccgccgagaccgccgccgcgccggcccgcgcc
gagcgcacccgccgccgtgccacctcggccgccggcgcccccaccgccccggccgccgag
gccggcgccgaggccgccaccgtcgcggtggccgagcccaagcaggccgagcgtccggcc
gagacccgcggcttcgagggccgcgaggagggtcgtgagacccgtcgtgaccgccgcgag
cgccgtgaccgccgcgagtcgggcgagcgcaccgagcgcaccgagcgccaggacggcgcc
gaggcccaggccgggcaggacggcgaggggcgcgagtcccgccgcgaccgccgcaaccgc
cgcgagcgcgccgaccgccagggcggccagcagggccagcagcagggccagggcgacggc
cagcagcgccgcgagggcggccagcaggtccagcagccgcaggcccagcagggcggctac
gacgacgacgagttcggcgagggccgccggggccgtcgcggccgctaccgggaccgccgg
ggccgtcgcggccgcgagggcttcgagaccggcgccgtcgagccgcagatcggcgaggac
gacgtcctgatcccggtcgcgggcatcctcgacatcctcgacaactacgcgttcgtgcgt
acctccggctacctgccgggccagaacgacgtctacgtctcgctcgcccaggtccgcaag
aacggcctgcgcaagggcgacgccatcaccggtgcggtgcgccagccgcgcgagggcgag
cgccgcgagaagttcaacgccatggtgcggctggactccgtcaacggcatggacccggag
accggccgcggccgccccgagttcaacaagctcaccccgctctacccgcaggagcggctg
cgcctggagaccgacccgggcgtgctgaccacccggatcatcgacctggtgtcgccgatc
ggcaagggccagcgcggtctgatcgtggcgccgccgaagaccggcaagaccatggtgctg
caggcggtcgccaacgcgatcacccacaacaaccccgagtgccacctgatggtcgtcctg
gtcgacgagcgtccggaagaggtcaccgacatgcagcggtcggtgaagggcgaggtcatc
tcctcgaccttcgaccgcccggccgaggaccacaccaccgtcgccgagctggccatcgag
cgcgccaagcgcctggtggagctgggccacgacgtggtcatcctgctggactcgatcacc
cgcctgggccgcgcctacaacctggcggccccggcctccggccgcatcctgtccggtggt
gtcgactcgaccgcgctgtacccgccgaagaagttcttcggtgccgcgcgcaacatcgag
aacggcggctcgctgaccatcctggccaccgcgctggtcgagaccggctcgcgcatggac
gaggtgatcttcgaggagttcaagggcaccggcaacatggagctcaagctcgaccggaag
ctctcggacaagcgcatcttcccggccgtcgacgtggacgcctccagcacccgcaaggag
gagatcctgctcggcagcgaggagttggccatcgtctggaagctgcgccgggtgctgcac
gcgctcgactcgcagcaggcgatcgagctgctcctggacaagatgaagcagaccaagagc
aacgccgagttcctggtgcagatcgccaagaccacccccggctccggcgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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