KEGG   Candidatus Kinetoplastibacterium crithidii (ex Angomonas deanei ATCC 30255): CKCE_0391
Entry
CKCE_0391         CDS       T02413                                 
Symbol
uvrD
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
kci  Candidatus Kinetoplastibacterium crithidii (ex Angomonas deanei ATCC 30255)
Pathway
kci03420  Nucleotide excision repair
kci03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:kci00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CKCE_0391 (uvrD)
   03430 Mismatch repair
    CKCE_0391 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kci03400]
    CKCE_0391 (uvrD)
Enzymes [BR:kci01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CKCE_0391 (uvrD)
DNA repair and recombination proteins [BR:kci03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CKCE_0391 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     CKCE_0391 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor AAA_12 Viral_helicase1 AAA_30 AAA_11 DnaB_2
Other DBs
NCBI-ProteinID: AFZ82822
Position
complement(420730..422982)
AA seq 750 aa
MNLDDLNNAQRKAVTTDNSHSLVLAGAGSGKTKVLSSRIAWLINTGQASFNEVLAVTFTN
KAAREMVSRISMMLDRDMKGFWIGTFHGLCHKMLRLNWREANLIQNFQIIDMSDQLSLIK
RLMKSANVNESKYSARDLQKIINSYKEKGLRSNEIDVYDSYNKYIAEFYHLYEHQCIRDG
LLDFAELLLKSYDLLKNNQTIRNYYQERFKYILVDEFQDTNSLQYGWLRLLIGNSTSVFA
VGDDDQSIYAFRGANIDNMSLFDKEYAKGNIVRLEQNYRSMGHILGAANSLIRYNNGRLG
KKLWTQEGDGEKVLIVEKHNDLLESQWIVDEIKNIVKNGIKQDDIAVLYRSNAQSRVLEH
ALFLSGISYKVYGGLRFFERQEIKNVLAYLRLIVNRNDDSAWLRSVNFPIRGIGTRTIES
LFEITKNKNISLYDAVAYHSGRSKNNLLMFNNIISTLEESSRKLTLVQLIEHVLEFTGIN
AFYKNEEETDRLDNLKELVTAATIFSGENNFSEIPASLLIDDLKENLDVSLNNNIYLEQE
KITPLLSFLSHASLEAGDNQSESEQSSVQLMTVHAAKGLEFKVVFITGVEEGLFPHENSM
SDNSSIEEERRLMYVAITRARKKLYITMANSRMLRGQVRYSVKSRFISEVGEGNVIFVKN
KEQILPNNYLKSNSRFTSNSHQQSNKLSSGNTNFVDINGKKFVIGQNVKHKKFGDGTIIK
LIGHGEESQAQISFNNCGIKTIMLGIARFE
NT seq 2253 nt   +upstreamnt  +downstreamnt
atgaatttagatgacttaaataatgctcaaagaaaggctgtgactacggacaattcacat
tctttggtgttggctggtgcaggtagtggtaaaactaaggttctttcttctagaatagcc
tggcttatcaatactggtcaggcatcttttaatgaggttttggctgttacttttactaac
aaggccgctcgtgagatggtgtctagaatatctatgatgttggatagggatatgaaaggt
ttttggattggtacctttcatgggttgtgtcataaaatgcttagattgaattggcgcgag
gctaatttaatacaaaatttccaaattatagatatgtcagatcagctatctttgataaag
cgtttgatgaaatctgcaaatgttaatgaatctaagtattcagcaagggatctacaaaaa
attataaattcttataaggaaaagggtcttagatctaatgagatagatgtttatgattca
tacaataaatatattgctgagttttaccatctttatgagcatcaatgtattcgtgatggt
ttgcttgattttgcagaattgttgctgaaatcctatgatcttttaaaaaataatcaaaca
attagaaattattaccaagaacgttttaagtatattttagtagatgaatttcaggatact
aatagcttgcagtatgggtggttacgtttattgataggtaattctacttcagtatttgct
gtaggtgatgatgatcaatctatttatgcatttcgtggtgcaaatatagataatatgtct
ttatttgataaggaatatgccaaaggtaatatagtccgcttggaacaaaattatagatcc
atgggccatatattaggtgcagctaattctttgattaggtataacaatgggcgtttaggt
aagaaattatggacgcaagaaggtgatggtgaaaaagtattaatagttgaaaaacacaat
gatctattagagtcacaatggatagttgatgaaattaaaaatattgttaaaaatggtatt
aaacaagatgatatagctgttttatacagaagtaatgctcagtcaagagttttagagcat
gctttatttttaagtggtatttcttataaagtttatggtggattaagattttttgaaaga
caagaaattaagaatgtattagcttatttgaggcttattgtaaatcgtaatgatgactct
gcttggcttagatcagttaattttccaattagaggaataggaactcgtactatagaatca
ttattcgaaataacaaaaaataagaatattagtttgtatgatgctgttgcatatcattca
ggtagaagtaaaaataatttattgatgtttaataatattatttctactttagaagagtct
tcaagaaaattaactcttgttcaattaatagaacatgttttagaatttactgggattaat
gctttttataaaaatgaagaagaaactgatcgtttggataatttaaaggagttagttaca
gccgctactattttttcaggtgaaaataatttttctgaaattcctgcaagtcttttgatt
gatgatttaaaagaaaatcttgatgtaagtttgaacaataatatttacctagaacaagag
aaaattactcctttgctatcttttttatcacatgcttctttagaagctggagataaccaa
tctgaatcagagcaatcatctgtgcaattaatgacggttcatgctgcaaaaggattggaa
tttaaggttgtttttattacaggtgttgaggaaggtttatttccacatgaaaatagtatg
tctgacaattctagtattgaagaagaaagacgtttaatgtatgttgctattacaagagct
agaaaaaaattatatataactatggcaaatagtcgtatgttaagaggtcaagtaagatat
tctgttaaatctcgttttatttctgaggttggtgagggtaatgtaatttttgtaaaaaat
aaagagcaaattttaccaaataattatttaaaaagtaattctagatttacttcgaattct
catcaacagtcaaataagttatccagtggtaatacgaattttgttgatattaatggtaag
aagtttgtaattggacaaaatgtaaaacataaaaaatttggtgatggtacaattattaag
ttaattggtcatggagaggaatcacaagcccagataagctttaataattgtggtataaag
actattatgttaggtatagctaggtttgaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (39)   

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