KEGG   Kribbella flavida: Kfla_3239
Entry
Kfla_3239         CDS       T01155                                 
Name
(GenBank) excinuclease ABC, A subunit
  KO
K03701  excinuclease ABC subunit A
Organism
kfl  Kribbella flavida
Pathway
kfl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:kfl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Kfla_3239
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kfl03400]
    Kfla_3239
DNA repair and recombination proteins [BR:kfl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Kfla_3239
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Kfla_3239
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 AAA_21 nSTAND1 RsgA_GTPase APS_kinase AAA_22 BCA_ABC_TP_C HC2 nSTAND3 NACHT DnaJ_CXXCXGXG ExoX-like_C Viral_helicase1 cobW DUF3090 Septin IIGP
Other DBs
NCBI-ProteinID: ADB32301
UniProt: D2Q4I7
Position
3459734..3462754
AA seq 1006 aa
MSDRLIVRGAREHNLKDVSLDLPRDAMIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARAGRPH
CPECGEPIAKQTPQQIVDRVMELDEGTRFQVLAPVIRGRKGEYLDLFRQLTGQGFSRARV
DGDTIQLTEPPKLDKQKKHTIDVVVDRLAVKSSAKQRLTDSVETALGLSGGIVTLDFVDL
DEKDPQRERRFSEKLACPNDHPLQLDELEPRSFSFNSPYGACPACSGLGTRMEVDPELLV
PDPSKSLDEGAIQPWSGANVSQYFERLLTALAKDLKIKTTTPFGELPEKARRALLTGHDR
QVHVSYKNRYGRERSYYTTFEGVIPYVERRHAEASSDTSRERFEEYMREVPCLTCNGARL
KPISLAVTLGGKNIAEISAMSIDEVHGFLVELDLSPREKQIAERVTKEIGERLRFLLDVG
LDYLALNRPAGSLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIDTLVRL
KDLGNTLIVVEHDEDTIDHADWVVDIGPGAGEHGGQVVVSGTVEDLRNHPDSITGAYISG
RREIPIPPVRRPLTEGRELTVYGAREHNLQDIDVTVPLGVFVAVTGVSGSGKSTLVNDIL
YTSLARQIYGARAVPGRHTKISGLEQVDKVIHVDQSPIGRTPRSNPATYTGVWDHVRKLF
AETPEAKVRGYQQGRFSFNVKGGRCEACSGDGTLKIEMNFLPDVYVPCEVCHGARYNRET
LEVHYKGKTVADVLDMPIEEAAEFFEAIPAISRHLKTLNEVGLGYVRLGQPAPTLSGGEA
QRVKLASELQKRSTGRTVYVLDEPTTGLHFEDIRKLLGVLGGLVDKGNSVLVIEHNLDVI
KTADWIIDLGPEGGRRGGTLVAEGTPEEVAANPASYTGQFLAEILHGRAAKPSAKKAAEK
TATVTKKAPASKAPAKKAVAAKKTVAKKVAAQKAPAKKVAAKRAAG
NT seq 3021 nt   +upstreamnt  +downstreamnt
gtgtctgaccgtctgatcgtgcgcggagcgcgtgagcacaacctgaaggacgtctcgctc
gacctgccgcgcgacgccatgatcgtcttcaccggactgtccgggtccggcaagtccagc
ctcgccttcgacacgatcttcgccgagggccagcgccgctacgtggagtcgctgtcggcg
tacgcccggcagttcctcggccagatggacaagcccgacgtcgacttcatcgagggcctg
tccccggccgtgtcgatcgaccagaagtcgacctcccgcaacccacgctccaccgtcggc
acgatcaccgaggtctacgactacctgcggctgctgttcgcccgggccggccggccgcac
tgcccggagtgcggcgagccgatcgcgaagcagaccccgcagcagatcgtcgaccgggtg
atggagctggacgagggcacccgcttccaggtgctcgcaccggtcatccgcggccgcaag
ggcgagtacctcgacctgttccgccagctcaccggccagggcttctcccgggcccgggtc
gacggcgacacgatccagctcactgagccgccgaagctggacaagcagaagaagcacacc
atcgacgtcgtggtcgaccggctcgcggtgaagagctcggccaagcagcggctgaccgac
tcggtggagaccgcgctcgggctctccggcggcatcgtcacgctggacttcgtcgacctg
gacgagaaggacccgcagcgcgagcgccggttctccgagaagctcgcctgcccgaacgac
caccccctgcagctcgacgagctggagccgcggtcgttctcgttcaactcgccgtacggc
gcctgcccggcctgctccgggctcggcacccggatggaggtcgaccccgagctgctggtc
ccggacccgtcgaagtcgctggacgagggcgcgatccagccgtggtcgggcgcgaacgtc
tcgcagtacttcgagcggctgctgacggcgctcgcgaaggacctgaagatcaagaccacc
acgccgttcggtgagctgcccgagaaggccaggcgggcgctgctcaccgggcacgaccgg
caggtgcacgtctcctacaagaaccgctacggccgcgagcgctcgtactacacgaccttc
gaaggcgtcatcccgtacgtcgagcgccggcacgcggaggcctccagcgacaccagccgg
gagcgcttcgaggagtacatgcgcgaggtgccgtgcctgacctgcaacggcgcccggctg
aagccgatctcgctcgcggtcacgctcggcggcaagaacatcgccgagatcagcgcgatg
tccatcgacgaggtgcacggcttcctggtcgagctggacctgagcccgcgggagaagcag
atcgcggagcgggtcaccaaggagatcggcgagcggctgcggttcctgctcgacgtcggc
ctggactacctcgcgctgaaccgcccggccggctcgctgtccggcggcgaggcgcagcgg
attcggctggccacccagatcggctccggcctggtcggcgtgctgtacgtgctggacgag
ccgtcgatcggcctgcaccagcgcgacaaccgccggctgatcgacaccctggtccggctc
aaggacctgggcaacacgctgatcgtggtcgagcacgacgaggacaccatcgaccacgcc
gactgggtggtcgacatcggcccgggcgccggcgagcacggtggccaggtggtcgtctcc
ggcaccgtcgaggacctgcgcaaccacccggactcgatcaccggcgcgtacatctcgggc
cgccgggagatcccgatcccgccggtccgccgcccgctcaccgagggccgcgagctgacc
gtgtacggcgcccgcgagcacaacctgcaggacatcgacgtgaccgtcccactgggcgtg
ttcgtcgcggtcaccggggtgtcgggctcgggcaagtcgacgctggtcaacgacatcctc
tacacgtcgctggcccggcagatctacggcgcccgcgcggtgcccggccggcacaccaag
atctccggcctggagcaggtcgacaaggtgatccacgtcgaccagtcgccgatcggccgc
acgccgcggtccaacccggcgacgtacaccggggtctgggaccacgtccgcaagctgttc
gcggagacgccggaggcgaaggtccgcggctaccagcagggccggttctcgttcaacgtc
aagggcggccggtgcgaggcgtgctccggcgacggcacgctgaagatcgagatgaacttt
ttgcccgacgtgtacgtgccctgtgaggtgtgccacggcgcgcggtacaaccgcgagacg
ctcgaggtgcactacaagggcaagacggtggccgacgtcctggacatgccgatcgaggag
gccgccgagttcttcgaggcgatcccggcgatttcgcggcacctgaagacgctgaacgag
gtcggtctcggctacgtccggctcggccagccggcgccgacgctgtccggcggtgaggcg
cagcgggtcaagctggcgtcggagctgcagaagcggtccaccgggcgcacggtgtacgtg
ctggacgagccgaccaccggtctgcacttcgaggacatccgcaagctgctgggtgtgctc
ggtgggctggtcgacaagggcaactcggtgctggtgatcgagcacaacctggacgtgatc
aagaccgccgactggatcatcgacctcggtccggagggcggtcgccggggcggcacgctg
gtggcggagggtacgccggaggaggtcgcggccaaccccgcgtcgtacaccgggcagttc
ctggccgagatcctgcacggccgggccgccaagccgagcgcgaagaaggcggcggagaag
accgccacggtgacgaagaaggctccggcgagcaaggcaccggcgaagaaggcggtcgcc
gcgaagaagacggtggccaagaaggtcgccgcgcagaaggcgccggccaagaaggtcgcg
gccaagcgggcggccggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (22)   
   Pfam (22)   
All databases (42)   

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