KEGG   Candidatus Kinetoplastibacterium galatii: ST1E_0677
Entry
ST1E_0677         CDS       T02466                                 
Name
(GenBank) DNA-binding protein HU-beta
  KO
K03530  DNA-binding protein HU-beta
Organism
kga  Candidatus Kinetoplastibacterium galatii
Brite
KEGG Orthology (KO) [BR:kga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:kga03032]
    ST1E_0677
   03036 Chromosome and associated proteins [BR:kga03036]
    ST1E_0677
   03400 DNA repair and recombination proteins [BR:kga03400]
    ST1E_0677
DNA replication proteins [BR:kga03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    ST1E_0677
Chromosome and associated proteins [BR:kga03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    ST1E_0677
DNA repair and recombination proteins [BR:kga03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      ST1E_0677
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1 Pox_F12L HU-CCDC81_euk_2 DLP_helical
Other DBs
NCBI-ProteinID: AGF49061
UniProt: M1LYA7
Position
complement(386599..386871)
AA seq 90 aa
MNKTELIDHIAVNAGISKASANRAIDSFLDAIKNTMKKGDTVTLVGFGSFAVSTRAERTG
RNPRTGETIKIKKTRVPKFKPGKALKEAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaataaaacagaactcattgatcacattgctgttaatgccggtatatcaaaagcatca
gctaatagagctatagattcttttctagatgctattaaaaacacaatgaaaaaaggtgat
actgtaacattggtaggttttggttcttttgctgtatcaactagagcagaaagaacagga
cgtaatccacgtaccggtgaaacaataaagatcaaaaaaaccagagttcctaaatttaag
ccaggcaaagccttaaaggaagcagtaaattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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