KEGG   Candidatus Kinetoplastibacterium galatii: ST1E_0742
Entry
ST1E_0742         CDS       T02466                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
kga  Candidatus Kinetoplastibacterium galatii
Pathway
kga03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kga00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ST1E_0742
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kga03021]
    ST1E_0742
   03019 Messenger RNA biogenesis [BR:kga03019]
    ST1E_0742
Transcription machinery [BR:kga03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     ST1E_0742
Messenger RNA biogenesis [BR:kga03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     ST1E_0742
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 NACHT OB_RNB DUF3086 AAA_22
Other DBs
NCBI-ProteinID: AGF49106
UniProt: M1LYF0
Position
439302..440558
AA seq 418 aa
MHLNELKTLHVSQLLEIALSLEIDNANRLRKQELMFAIMKKRAKQGEQIFGDGVLEVLPD
GFGFLRSPETSYLASTDDIYMSPSQIRRINLHTGDSIEGEVRTPKDGERYFALVKVDKVN
GVAPELLKHRIMFEDLTPLHPCQHMRLERDIKSEENLTGRILDVFSPIGKGQRGLIVASP
KSGKTIMMQHIAHAIASNFPDAVLIALLVDERPEEVTEMRRTVKGEVVASTFDEPATRHV
QVAEMVIEKAKRLVEMKKDVVIILDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTILGTALIETGSRMDEVIYEEFKGTGNSEIHLERRIAEKRVYPAINL
NKSGTRREELLIKPDILQKVWVLRKFIHDMDEIESMEFILDKMRNTKNNNDFFEMMKK
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgcatctaaacgaactaaagacgctacatgtttcacaattgctagaaatagctttgagc
ttagaaatagataatgctaaccgcttacgcaaacaggaattaatgtttgcaataatgaaa
aaacgagcaaaacaaggagaacaaatttttggtgatggtgtactagaagtcttgccagat
ggatttggatttctgagatcacctgaaacatcttatctagctagcactgatgatatatac
atgtctccatctcaaataagaagaataaatctacatacaggagattcaatagaaggagaa
gttcgtacaccaaaagatggagagagatactttgcattagtgaaagttgataaagtaaat
ggcgtggctcctgaattacttaaacatagaatcatgtttgaggatttgacccctctacat
ccttgccaacatatgcgcctagagagagatattaaaagcgaagaaaacctcactggtagg
atactagatgtattttctccaataggtaaaggacagagaggtttaatagttgcaagtcca
aaatcaggaaaaactataatgatgcaacatatagctcacgctattgcatctaatttccca
gatgctgtgttaatagcattattagtggacgaaagacctgaagaagtcacggaaatgaga
cgtactgttaagggagaagtagtagcctcaacatttgatgagccagcgacaagacatgta
caagttgctgaaatggtcatagaaaaagcaaaaagattagtcgaaatgaagaaagatgta
gttattattcttgactctataacaagattagcaagggcatataacactgttgttccatct
tctgggaaagttttaactggaggtgtagatgccaatgccttgcaacgtcctaaaagattt
tttggagctgctagaaatatagaagaaggaggatcacttactattttgggaactgctctt
atagaaacaggtagtagaatggatgaagttatctacgaggaatttaaaggaacaggtaat
tcggaaatacatttagaaagacgtatagcagaaaaacgtgtatatcctgctataaattta
aataaatcaggaacgagaagagaagaattattaattaaacctgatattttacaaaaagtt
tgggttttaagaaaatttattcatgatatggatgaaatagaatctatggagtttatactc
gataaaatgcgtaatacaaagaataataacgacttttttgaaatgatgaaaaagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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